KEGG   Yersinia intermedia: CH53_3816
Entry
CH53_3816         CDS       T03608                                 
Name
(GenBank) DEAD_2 family protein
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
yin  Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:yin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yin03400]
    CH53_3816
Enzymes [BR:yin01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     CH53_3816
DNA repair and recombination proteins [BR:yin03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CH53_3816
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII DEAD_2 SLFN-g3_helicase UVR
Other DBs
NCBI-ProteinID: AJJ17855
LinkDB
Position
4231655..4233559
AA seq 634 aa
MTDDFATDGALAQAITGFNPRESQRRMAAAISESIDAKQQLVVEAGTGTGKTFAYLAPAL
RADCKVIISTGSKALQDQLYSRDLPTVATALKYKGKLALLKGRSNYLCLERLEQQSLAGG
ELASETLVDLVRLRGWSAETIDGDISTCGQVAEDSFVWPLVTSTNDNCLGSDCPLYKDCF
VVKARRKAMDADVVVVNHHLFLADMVVKESGFAELIPTADVMIFDEAHQIPDIASQYFGQ
QLTSRQLMDLAKDIIIAYRTEVRDSAQLQKSADRLTQSTQDFRLVLGDPGYRGNLRDVME
QPAIQRALLLLDDALELCYDVMKLSLGRSAMLDAAFERATVYRNRLKRLKDVTTPGYSYW
YECNSRHFVLALTPLSVSDRFRELIEEKPGSWIFTSATLSVNDQLSHFTSRLGLTNAKTL
LLPSPFDYANQALLCVPRNLPSANEPGAARKLAVMLKPLIDANKGRCFFLCTSHQMMRGL
AEEFRASMTLPVLVQGETSKGQLLAQFVAAGNALLVATSSFWEGVDVRGDALSCVIIDKL
PFTSPDDPLLKARIEDCRLRGGDPFNDVQLPDAVITLKQGVGRLIRDIDDRGVLVICDNR
LVMRPYGAMFLNSLPPAPRTRDLAKAIAFLKQRD
NT seq 1905 nt   +upstreamnt  +downstreamnt
gtgacagacgattttgcaacagacggcgcattagcgcaggccattacaggttttaacccc
cgagagtctcagcgccgaatggctgcggccatcagtgaatctattgatgccaaacaacaa
ttagtagtagaggcaggtaccggtaccggtaaaacatttgcctatttagcgcccgcactg
cgtgctgattgcaaagtgattatctccacaggctcgaaagcgttacaagatcagctctat
tcgcgtgacttacccacggtagccactgctctcaaatacaaagggaagttggccttatta
aaagggcgctcaaactatctttgtctggaacgccttgaacagcaatcattggccggaggc
gaattagccagtgagacattggttgatttggttcgtttgcgtggctggtcagccgaaacc
atcgacggtgatatcagtacctgtggtcaggttgcggaagatagttttgtctggccgttg
gtcaccagtaccaatgataactgcctgggcagtgattgcccgctgtataaagattgtttc
gtggtaaaagcccgtcgtaaggcgatggatgcggatgtagtggtggttaaccatcatctg
ttcctggcggatatggtggtgaaagagagcggttttgccgaactgatccccactgcggat
gtgatgattttcgatgaagcccaccagatccccgatattgccagccaatactttggtcaa
caactgaccagtagacaactaatggatttggcaaaagacattattattgcctatcgcacc
gaagtgcgtgactcggcccaattgcaaaaaagcgctgaccgcctgacgcaaagcacacaa
gatttccgtctggtactcggcgacccagggtatcgtggcaatttacgcgatgtgatggaa
caaccggcgattcagcgggcgttgctgttgctcgatgatgcgttagagttgtgttatgac
gtgatgaaactttcccttggtcgctcagccatgctggatgccgcttttgaacgtgcaacg
gtgtatcgcaaccgccttaagcgcttaaaagatgtcactacgcctggctacagctattgg
tatgagtgtaattcacgccatttcgtgctggcgctgacaccgctgtcggtttctgatcgt
tttcgtgaactgatagaagaaaaaccgggaagctggatttttacctcagccacgctatcg
gttaatgatcagttgtcacattttacctcaaggttggggctaacgaacgccaaaacccta
ctactgcccagtccgtttgattacgccaatcaggcattgctctgtgtaccacgcaatttg
ccgtcggcgaatgaacctggggctgctcgtaaactggcggtgatgctaaaaccattgatt
gatgccaataaagggcgttgcttctttttgtgtacctcacaccagatgatgcgtggttta
gccgaagagttccgcgccagtatgacactgccagttttggttcaaggcgaaaccagcaaa
gggcaattgctggcacagtttgtcgcagcaggcaatgcgctgttagtggcgaccagcagt
ttctgggaaggggtggatgtgcggggcgacgcgttatcttgtgttatcatcgacaagctg
ccgtttacctcaccggatgaccctttgttgaaagcccgtatcgaagattgccgcctacgc
ggcggtgacccgtttaatgatgtgcaattgcctgatgccgttatcacgttgaaacaaggt
gtggggcgtttgattcgtgacatcgacgatcgtggggtgctggttatctgtgataatcgc
ctggtgatgcgcccttatggcgcgatgttccttaatagcctcccgcccgcaccccgcacc
cgtgatttggcgaaagccatcgcttttctcaagcaacgcgattaa

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