KEGG   Yersinia intermedia: CH53_3858
Entry
CH53_3858         CDS       T03608                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
yin  Yersinia intermedia
Pathway
yin03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:yin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CH53_3858 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yin03400]
    CH53_3858 (xth)
Enzymes [BR:yin01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     CH53_3858 (xth)
DNA repair and recombination proteins [BR:yin03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     CH53_3858 (xth)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_3
Other DBs
NCBI-ProteinID: AJJ18810
UniProt: A0ABX6F8C5
LinkDB
Position
complement(4282977..4283783)
AA seq 268 aa
MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQHGYHVFYHGQK
GHYGVALLTKNEPLAVRRGFPTDEEDAQRRIIMADIATSNGPLTVINGYFPQGESRDHPI
KFPAKERFYADLQQYLEQQLSADAQVLIMGDLNISPTDLDIGIGEDSRKRWLRTGKCSFL
PEERAWLARLQNWGLVDTFRAANPECNDQFSWFDYRSRGFDENRGLRIDLLLASQPLATR
CIATGIDYEIRGMEKPSDHAPVWSEFAL
NT seq 807 nt   +upstreamnt  +downstreamnt
atgaagtttgtctcttttaatatcaatggcctacgtgctcgaccacatcaactagccgcg
atcatcgagcaacatcaaccagatgtgattggccttcaggaaacgaaagtccatgatgat
atgtttccccttgaggatgtcagtcagcatggttatcacgttttttatcatgggcaaaaa
ggccattatggtgtggcgctgttaaccaaaaatgagcctttagcggttcgtcgtggcttc
ccaacagatgaagaagatgcacaacgccgtattattatggctgatatcgcaacatcaaat
ggtcccctcactgttattaatggttatttccctcagggagaaagccgtgatcacccaata
aaattcccagcaaaagagcgtttttacgctgacctacagcaatacctggagcaacaactt
tcagcggatgctcaggtactgattatgggggatttaaatatcagcccaactgatctcgat
attggtatcggcgaagatagccgtaaacgttggctgcgaaccgggaagtgttcattcctg
ccagaagaacgggcctggctggcgcgattacaaaactgggggctggttgatacattccgc
gcagccaatcctgaatgtaacgatcaattttcgtggtttgattatcgctcccgtggtttt
gatgagaacagaggcctgcgcatagatttattgttagcaagccagccactggctacccgt
tgtattgcgacagggattgattacgaaattcgcggtatggaaaaaccctcagaccacgcg
ccagtatggtctgaattcgccctctga

DBGET integrated database retrieval system