Yersinia intermedia: CH53_4110
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Entry
CH53_4110 CDS
T03608
Name
(GenBank) L,D-transpeptidase catalytic domain protein
KO
K19236
L,D-transpeptidase YcfS
Organism
yin
Yersinia intermedia
Pathway
yin01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
CH53_4110
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
yin01002
]
CH53_4110
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yin01011
]
CH53_4110
Peptidases and inhibitors [BR:
yin01002
]
Cysteine peptidases
Family C82
CH53_4110
Peptidoglycan biosynthesis and degradation proteins [BR:
yin01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
CH53_4110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
Motif
Other DBs
NCBI-ProteinID:
AJJ20133
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All DBs
Position
complement(4562964..4564031)
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AA seq
355 aa
AA seq
DB search
MKRALTLIGMLFATCMAGSITAANATEYPLPPANSRLIGENTTYTVPNDGRPLEAIAADY
KIGLLGMLEANPGADPYLPLPGSVLTIPTQMLLPDTPREGIVINLAELRLYYYPKGQSKV
IVYPIGIGQLGRNTPTMTTSVSQKIPNPTWTPTANIRKHYLAQGVTLPSVVPAGPENPMG
LFAMRLSAGGGEYLIHGTNANFGIGMRVSSGCIRLRPDDIKALFSSVPKGTRVQIVNEPV
KYSVEPDGKRYVEVHQPLSRVDSDDPQTMPIAISNGLQKFMSDSQTDAQVVQDAIVRRAG
MPVIVTVGETAPVEAPAAVAPQGEQQAQPQTEGQQPANEAAPKLVQPGPVYSAAN
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgcattaaccttgattggtatgttattcgcaacttgtatggcgggaagtatt
accgctgccaatgcgaccgagtatcctctaccgccagccaatagccgtctgattggtgaa
aatactacctataccgttccaaatgatggccgtccgcttgaggctattgctgctgattat
aaaatcggcttgctggggatgcttgaagccaacccaggtgctgacccgtatctgccatta
ccgggttcagtgttaaccatcccaacccagatgctgctgcctgataccccacgtgaaggc
atcgtcatcaacctggctgagctgcgtctttattactaccctaaaggccagagcaaagtc
atcgtgtatcctatcggtatcggccagttagggcgtaataccccgactatgacgacatct
gttagtcagaagatcccgaatccaacctggacaccgactgcaaacatccgcaagcactac
ctggcacaaggcgttaccttgccatcagtcgttccagccgggccggaaaacccaatgggc
ctgtttgctatgcgcttgtcagccggtggcggtgagtatttgatccacggtactaatgcc
aactttggtatcggcatgcgtgttagctccgggtgtatccgtttacgtcctgatgatatc
aaggcactgttcagctcagtacctaaaggtactcgcgtacagatagtcaacgaaccggtt
aaatattccgtagaacctgatggtaaacgttatgttgaggttcatcagccgttgtcccgc
gtggacagtgatgacccgcaaacgatgccaattgcgatcagcaacggcctacagaaattt
atgagcgacagccagactgatgcacaagtggtccaggatgcgattgtacgccgcgctggc
atgcctgtcatcgtaacggtaggtgagacagcacctgtggaggctccggccgctgtagcg
cctcagggcgagcaacaggcgcaaccacagactgaagggcagcaaccggctaacgaagcc
gcacctaagctggttcagccaggtccggtctactctgccgctaattaa
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