Yersinia intermedia: CH53_412
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Entry
CH53_412 CDS
T03608
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
yin
Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yin03016
]
CH53_412 (truA)
Enzymes [BR:
yin01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CH53_412 (truA)
Transfer RNA biogenesis [BR:
yin03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CH53_412 (truA)
Prokaryotic type
CH53_412 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
WVELL
Motif
Other DBs
NCBI-ProteinID:
AJJ20473
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All DBs
Position
complement(488453..489295)
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AA seq
280 aa
AA seq
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MSELELAQQQDVVAETASIKIALGIEYNGSRYFGWQRQLEVASVQACLEAALSKVANEPI
GVFCAGRTDAGVHATGQVVHFVTTAVRKDAAWTMGVNSHLPSDIAVRWIKTVDDDFHARF
SATARRYRYIIFNHRYRPAVLAQGVTHCYLPLDAEKMEHAAQCLLGENDFTSFRAIQCQS
RTPWRNVKHVKVTRHGAYIVVDIKANAFVHHMVRNIVGSLIEIGCGNQDVNWMAELLALK
DRSRAAATAKAEGLYLVSVDYPERFALPIAPMGPLFLADD
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacttgagttggctcagcaacaagacgtcgtggctgaaacggccagtataaaa
attgcgctgggtattgaatataatggcagccgctattttggttggcaacggcagttagag
gttgccagtgtgcaggcttgcctggaggccgctttatcgaaagtagccaatgaacccatc
ggtgtattttgtgctgggcgcactgatgctggcgtacatgccaccgggcaggtggtgcat
tttgtcaccacggcggtgcgtaaagatgccgcctggactatgggggttaatagtcattta
ccttcagatatcgccgtgcgttggataaaaacagtggatgatgattttcatgcccgtttc
agcgcaaccgcccgccgttatcgctatattatttttaaccatcgctatcgcccggcggtt
ttggcgcaaggggtaacccattgctacctgccgctggatgcggaaaaaatggaacacgct
gcgcaatgtttactcggcgagaatgattttacctcatttcgcgcgatacagtgccagtct
cgtacgccatggcgaaatgtaaaacatgtcaaagttacccgacatggcgcgtatatcgtg
gtagatatcaaggccaacgcttttgtccatcatatggtgcgtaatattgttggtagcctg
attgagattgggtgtggtaatcaggatgtcaactggatggccgagttgctggcactgaaa
gaccgatcacgtgctgcggcaacggcgaaagccgaggggttgtatttagtctctgttgat
tatcctgaacgctttgctctaccaatagcgccaatggggccactctttttggcagatgac
tga
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