Yersinia intermedia: CH53_4262
Help
Entry
CH53_4262 CDS
T03608
Name
(GenBank) periplasmic pectate lyase family protein
KO
K01731
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
yin
Yersinia intermedia
Pathway
yin00040
Pentose and glucuronate interconversions
yin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CH53_4262
Enzymes [BR:
yin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
CH53_4262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_2
Sulf_coat_C
Motif
Other DBs
NCBI-ProteinID:
AJJ20582
LinkDB
All DBs
Position
4694120..4695787
Genome browser
AA seq
555 aa
AA seq
DB search
MDFVGNIKGSDAMMVNWLCAIRSYVDLVQSVGHSSQNPTPLLADGFDVLTHQPVVWEFPD
GHKTPISNFASQQNWLRTLDALSLVTQDPQYHQQARVQSSYFMQHGVHDQSGLFYWGGHR
FLNLDTLTTEGPESKAQVHELKHHLPYYDFLVTIDREKTLNFLQGFWHAHVEDWQTLDLG
RHGSYDKLRDPHVFTHARRDVVNPTDLPRLPETKGLTFVNAGTDLIYAAYKYAEYTGDIA
AAAWGKHLYRQYVLARNPETGLPVYQFSSPQQRRPIPADDNQTQSWYGDRAKRQFGPEFG
DIAREANVLFRDMRPLLIDNPLAMLDILRQQPDAQVLQWVIDGLKNYYRFAYDVESNTLR
PLWNDGQDMSGYVLQRDGYYGAKGTVISPFPLDVDYLLPLVRAWRLSEDEELLDLIGVLL
HRWQFAELNKQKRRASLMVGKKPAATAHLLLALIELAEHCQCSRLFELAWQVGDELFKQH
YHRGLFVESAQHRYFRIDNPIALAILTLIAAKQNKSAAVPQFITNGGYIHGDYRVNGENR
TLYDIDFIYPTLLNQ
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggattttgtaggcaacattaaaggcagcgacgcaatgatggttaactggctctgtgct
attcgcagctatgttgatctggtccagtctgttggccatagcagccaaaacccgacacct
ctgttagctgatggttttgatgtactgactcatcaaccggtggtgtgggaattccctgat
gggcacaagacaccaatatctaactttgccagccagcaaaactggctgcggacattggat
gccctcagtctggtgactcaagatccgcaatatcaccaacaagcacgggtgcaaagcagc
tatttcatgcagcatggcgttcatgaccaaagcggactgttttactggggcggccatcgt
ttcctgaatctggatacgttaacaaccgaagggccagagtcaaaagcacaagtacatgaa
ctgaaacatcatctaccttattacgattttctggtcactattgaccgggaaaaaacactt
aattttttgcaaggcttttggcacgcccatgtagaagattggcaaacactggatctgggc
cgccacggtagctacgacaagttacgcgacccgcatgtgttcactcatgcacgccgcgat
gtggttaaccctactgacttgccacgtcttcctgaaaccaaaggcctgacctttgtgaat
gcgggtactgacctgatttatgccgcgtataagtatgctgaatatacgggtgatatcgcc
gcagcggcttgggggaaacacctctatcgccaatatgtgttagctcgtaacccggaaaca
ggtttaccggtttatcagttcagttcgccacaacagcgtcgccctatcccggcggacgat
aaccaaacccaatcttggtatggcgatcgtgccaagcgccagtttggcccagaatttggt
gacattgcccgcgaagcaaatgtgctgttccgtgatatgcgcccactactgattgataat
ccattggcgatgttagatatcttgcgtcaacaacccgatgcccaggtcctacaatgggtt
attgatggcttaaaaaattactatcgttttgcttatgacgttgagagcaatacattgcgc
ccgttatggaacgatgggcaagacatgagcggttatgtgttgcagcgtgatggctactat
ggcgctaaaggtaccgttatttcgccattcccattagacgttgattatttactgccatta
gttcgcgcctggcgcttgagtgaagatgaagagctgttggatctaattggtgtattactg
caccgttggcagtttgctgaattgaataaacaaaaacgccgggcatcattgatggtgggt
aaaaaacccgctgccaccgcacacctgttgttggccttaattgaactggcggagcactgc
caatgtagccgattatttgagttagcctggcaagttggcgatgaactctttaaacaacat
taccatcgcggcctgtttgttgaatcggctcaacaccgttatttccgcatcgacaatccg
attgcattagcaatattgaccttaattgcagcaaaacaaaataagtctgctgctgtgcct
caatttattaccaacggtggttacattcatggagattatcgggtgaacggggaaaaccgt
actctgtatgatatcgattttatttatccgacgcttttgaatcagtaa
DBGET
integrated database retrieval system
