Yersinia intermedia: CH53_4272
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Entry
CH53_4272 CDS
T03608
Symbol
ogl
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
yin
Yersinia intermedia
Pathway
yin00040
Pentose and glucuronate interconversions
yin01100
Metabolic pathways
yin01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CH53_4272 (ogl)
Enzymes [BR:
yin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
CH53_4272 (ogl)
SSDB
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Tricorn_N
Motif
Other DBs
NCBI-ProteinID:
AJJ18206
UniProt:
A0A0T9MNY9
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Position
complement(4705803..4706969)
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AA seq
388 aa
AA seq
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MAKGKQIPLTFHTYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPW
NYYLLDLNTQVATQLTEGRGDNTFGGFLSPEDDALFYVKDGRNLMRVCLATLEETVVYQV
PEEWVGYGTWVANSDCTKLVGIEIKREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES
AVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGSNMRKVKTHAEGESC
THEFWVPDGSALVYVSYLKGSPDRFIYSADPQTLENRQLTSMPACSHLMSNYDGTLMVGD
GSDAPVDVQDDSGYKIENDPFLYVFNMKNGSQHRVARHDTSWQVFEGDRQVTHPHPSFTP
DDKQILFTSDVHGKPALYLATLPESVWQ
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaggtaaacaaatccccctgacatttcacacatatcaggatgcctctaccggt
gcacaagttacgcggttaacgccgcctgatgtcacttgccaccgtaactatttctatcaa
aaatgtttcacccgtgatggcagtaagttgttgttcggcggcgcttttgatggtccgtgg
aactattacttgttggatctcaacacgcaagtggcaacacaactgacagaagggcgtggc
gacaatacctttggtggtttcctgtcacctgaagacgacgcactgttttatgtcaaagat
ggccgtaacttgatgcgagtctgtcttgccacattggaagagaccgtagtttatcaagtg
cctgaagagtgggtgggttatggtacctgggtcgccaattcagattgtaccaaattggtt
ggtattgaaattaaacgtgaagactgggtacccttgaccgattggaagaaattccatgag
ttctatttcactaaaccttgctgccgtttgatgcgtgttgacttgaaaaccggtgagtcg
gcggtgattttgcaagagaatcaatggttaggtcacccaatctatcgcccttatgatgac
agtacggtcgcattctgccatgaaggtccacacgatctggttgacgcacgtatgtggcta
atcaatgaagatggtagcaacatgcgtaaagtgaaaacccatgccgaaggcgaaagctgt
acccatgagttctgggtgcctgatggttcggcgctggtgtatgtctcctatttgaaaggc
agcccggatcgctttatctacagtgcggacccacagacattggaaaaccgccaattgacc
tctatgccggcgtgttctcatctgatgagtaactacgacggtacgttgatggtcggcgat
ggttcagatgcaccggtagatgtacaagatgacagcggctataagattgaaaacgatcct
ttcttgtatgtattcaacatgaaaaatggcagtcagcatcgtgttgctcgccacgatacc
tcatggcaggtatttgaaggtgatcggcaggtgacgcatccacacccttcttttacccct
gatgacaaacaaattctgtttacatcagatgttcatggcaaacctgcgctctatttggcc
actttgcctgaatcggtctggcaatag
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