Yersinia intermedia: CH53_4383
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Entry
CH53_4383 CDS
T03608
Name
(GenBank) helix-turn-helix domain protein
KO
K07506
AraC family transcriptional regulator
Organism
yin
Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yin03000
]
CH53_4383
Transcription factors [BR:
yin03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CH53_4383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AJJ19879
LinkDB
All DBs
Position
complement(4813029..4813898)
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AA seq
289 aa
AA seq
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MLERYQAFETLKEHKARLHDCVQLGSGIQLAAWSNRDDCITQESPDHHTLSLYVADGYEC
YHKTRAGWKNGGGPDRFCIMPKGSLSSWDVRDDLSFVHLYCTDKHLRQLAEQIWERSPQS
IQVDERIFAEDPQITLLYRQFLLNCNWQEQANHLALSSAATLLMTHLLKNYTQLQWAIPV
IRGGLSPAVLKRVKEYIDGHLSQPLLLSDLAEQAGLSEFHFARMFKQNTGLAPHQFVLKA
RLSRAEQLLKHSMMPLIHIALECGFSSASHFSNCFKVAYGLTPSTIRQR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgttggaacggtatcaagcctttgaaaccctaaaagaacacaaagcccgcttgcatgat
tgtgtgcaacttggctcgggtattcaattggctgcctggtctaaccgcgatgactgcatt
acacaggaaagccccgatcatcacaccttgagcttgtatgttgcagatggttatgagtgc
tatcacaaaacacgcgctggctggaaaaacggtggtggcccagatcgtttttgtattatg
ccaaagggcagcttatccagttgggatgtgcgggatgatttgtcatttgtacatttatat
tgcactgataagcatctgcgccagcttgccgaacagatctgggagcgtagcccccagtca
attcaggttgatgagcgaattttcgcagaagatccgcaaataacgctgctatatcgccaa
tttttactgaattgtaactggcaagaacaggcaaatcatttagctctcagcagtgctgcg
accttgttaatgacccatttattaaaaaactacactcagttgcagtgggcaatccccgtg
attcgcggtgggttgtctccggcagtgttaaaaagagtgaaagagtatattgacggacat
ctttcacagccgttgctgttgtcagatcttgctgaacaggcagggttaagtgagttccat
tttgcacggatgtttaagcagaacactgggctggcaccacatcaatttgtgttgaaagcg
cggttatctcgcgcagaacagctattgaaacatagcatgatgccgcttattcatattgcc
ctggaatgtggtttcagctctgccagtcacttcagtaactgctttaaagtggcttatggc
ctgacgccttcgacgattcggcaacgctaa
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