Yersinia intermedia: CH53_4399
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Entry
CH53_4399 CDS
T03608
Symbol
icd
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
yin
Yersinia intermedia
Pathway
yin00020
Citrate cycle (TCA cycle)
yin00480
Glutathione metabolism
yin00720
Other carbon fixation pathways
yin01100
Metabolic pathways
yin01110
Biosynthesis of secondary metabolites
yin01120
Microbial metabolism in diverse environments
yin01200
Carbon metabolism
yin01210
2-Oxocarboxylic acid metabolism
yin01230
Biosynthesis of amino acids
yin04146
Peroxisome
Module
yin_M00009
Citrate cycle (TCA cycle, Krebs cycle)
yin_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CH53_4399 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
CH53_4399 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
CH53_4399 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CH53_4399 (icd)
Enzymes [BR:
yin01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
CH53_4399 (icd)
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Motif
Pfam:
Iso_dh
tRNA_synt_1c_R1
Motif
Other DBs
NCBI-ProteinID:
AJJ19834
UniProt:
A0A0T9MVP6
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All DBs
Position
complement(4828448..4829701)
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AA seq
417 aa
AA seq
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MESKVVVPAEGKKITVDAQGKLVVPHNPIIPFIEGDGIGVDVTPAMIHVVDAAVKKAYKG
ERKISWMEIYTGEKSTHVYGKDVWLPEETLDLIREYRVAIKGPLTTPVGGGIRSLNVALR
QQLDLYVCLRPVRYYEGTPSPVKHPELTNMVIFRENAEDIYAGIEWKAGSPEAEKVIKFL
REEMGVKKIRFPEQCGIGIKPCSEEGTKRLVRAAIEYAITNDRESVTLVHKGNIMKFTEG
AFKDWGYQLAREEFGGELIDGGPWVKIKNPNNGKEIIIKDVIADAFLQQILLRPAEYDVI
ACMNLNGDYISDALAAQVGGIGIAPGANIGDDCALFEATHGTAPKYAGQDKVNPGSIILS
AEMMLRHMGWFEAADLIIKGTEGAIQAKTVTYDFERLMEGAKLRKCSEFGQDIIDNM
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcaaagtagttgttccggcagaaggtaagaaaattactgtcgatgctcagggt
aaactggttgttccgcataatccgatcattccatttattgaaggtgacggtattggcgtt
gatgtgaccccagccatgatccacgtggtagatgccgcggttaagaaagcctataaaggc
gagcgtaaaatctcctggatggaaatctacaccggtgagaagtcaacgcatgtttatggc
aaagatgtttggttgccagaagaaacattggatctgattcgtgagtaccgtgttgcaatt
aaaggcccgttaactacccccgtcggcggcggtattcgttctttgaacgttgctttgcgc
caacaacttgatctgtatgtgtgtctgcgtccggtgcgttattacgaaggtactccaagc
ccggtaaaacaccctgaattgaccaacatggtaattttccgcgaaaatgctgaagatatc
tatgctggtatcgaatggaaagccggttcaccagaagctgaaaaggtgattaagttcctg
cgcgaagaaatgggtgtgaagaaaatccgtttccctgaacaatgcggtattggtatcaaa
ccttgttcagaagaagggactaaacgcttggttcgtgcggcaattgaatatgcaattacc
aacgaccgtgaatcagttactttggttcataaaggcaacattatgaaattcaccgaaggc
gcatttaaagactggggttaccagttagcgcgcgaggaatttggtggtgagctgatcgat
ggcggcccttgggttaaaatcaagaacccgaataacggcaaagagatcatcatcaaagat
gtgattgctgatgccttcctgcaacaaattctgctgcgccctgctgaatatgatgttatt
gcctgtatgaacctgaacggtgattatatctctgacgccttggctgcacaggttggcggt
atcggtattgctccgggtgccaacattggtgatgattgtgcgttgttcgaagccactcac
ggcaccgcgccaaaatatgccggtcaggataaagtgaacccaggctctatcattctgtcc
gcagaaatgatgttgcgtcatatgggttggttcgaagccgcagacctgattatcaaaggc
accgaaggcgcaattcaggccaagaccgtgacttatgatttcgaacgtctgatggaaggc
gctaaactgcgtaaatgtagcgagtttggtcaagacatcatcgacaatatgtaa
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