KEGG   Yersinia intermedia: CH53_4426
Entry
CH53_4426         CDS       T03608                                 
Name
(GenBank) hypothetical protein
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
yin  Yersinia intermedia
Pathway
yin03030  DNA replication
yin03430  Mismatch repair
yin03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:yin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CH53_4426
   03430 Mismatch repair
    CH53_4426
   03440 Homologous recombination
    CH53_4426
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:yin03032]
    CH53_4426
   03400 DNA repair and recombination proteins [BR:yin03400]
    CH53_4426
Enzymes [BR:yin01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CH53_4426
DNA replication proteins [BR:yin03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CH53_4426
DNA repair and recombination proteins [BR:yin03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CH53_4426
SSDB
Motif
Pfam: DNApol3-delta_C HolB_lid DNA_pol3_delta2 HEAT_2 PH_GAC
Other DBs
NCBI-ProteinID: AJJ18363
LinkDB
Position
complement(4859095..4859715)
AA seq 206 aa
MLKTLEEPPEKTYFLLDCHQPASLLATLRSRCFYWYLACPDTALSLQWLQRQVQAEPVMA
LAALKLSEGAPLAAERLLQPERWTLRTALCSALSGALNSSDLLSLLVQLNHDDAAERLQW
LSSLLLDALKWQQGAGEFAVNQDQLSLVQQLAQMASTPMLLQSTKQLAKCRHQLLSVVGV
NRELLLTELLLNWETALSTGTYSTSP
NT seq 621 nt   +upstreamnt  +downstreamnt
ttgttgaaaaccttggaagagccaccggagaaaacctatttcctgctggactgccatcaa
cctgccagtttgttagctacgctacgtagccgctgtttttactggtatttggcctgcccg
gataccgcactcagtttgcaatggttgcaacggcaagttcaggcagaaccggtgatggcg
ctggctgcgcttaaattgagtgagggcgcacccttggcagccgagcggttgttgcaaccg
gagcggtggacgctacgtactgcgctgtgtagcgcccttagcggtgcactgaacagttcg
gatctactgtcactgttagtgcagttgaaccatgatgatgcggctgagcgcctccaatgg
ctctcttcactgctgctggatgccttgaaatggcaacaaggtgctggtgagtttgcggtc
aatcaggatcaattgtcgttggtacaacagttggcgcaaatggccagtacaccaatgttg
cttcagtcaacaaaacaactggcaaaatgccgccatcaattattatctgtcgtcggtgtt
aaccgtgaattgttactcactgagttgctacttaactgggaaaccgcactgtccacgggc
acctattccacctcaccttga

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