Yersinia intermedia: CH53_466
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Entry
CH53_466 CDS
T03608
Name
(GenBank) helix-turn-helix family protein
KO
K03487
LacI family transcriptional regulator, asc operon repressor
Organism
yin
Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yin03000
]
CH53_466
Transcription factors [BR:
yin03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CH53_466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_31
TetR_N
TrmB
DUF4187
HTH_IclR
MarR_2
Sigma54_DBD
HTH_Tnp_ISL3
DUF7343
HTH_10
HTH_Crp_2
HTH_6
Motif
Other DBs
NCBI-ProteinID:
AJJ19836
UniProt:
A0A0T9MD87
LinkDB
All DBs
Position
544176..545213
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AA seq
345 aa
AA seq
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MSTMQEVAKKAGVSKATVSRVLSGKGYVSEVTKAQVYKAIEESGYRPNLLARNLATNKSQ
CIGLVVTNTLYNGNYFNEILSQAAKKLENNGRQLVLVDGKHSAEEEQEAIQFLLDLRCDA
IIIYPRFLTVDDMDVIIDKYKQPIMVVNRKLRKNHSHCIFCDHKGSSYNATKYLIERGHQ
DIAFITGSLDSPTAIERLSGYKEALRACSLPLRDSLIIQGKWTPLSGATAVESLLASQQP
FSAIIASNDDMAIGAMKRLNEVGINVPEAVSLIGFDNIPIAPFLSPSLSSIKDPVSGMIN
DVINRLISMLDGGYLSTENIFQSELIVRDSVSDGPYLGQSALNHQ
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaatgcaagaagtggcaaaaaaagcaggtgtctcgaaagccactgtttcgcgt
gttctgtcaggcaaaggctatgtcagtgaagtgactaaagcgcaggtatataaagcgatt
gaagagagcggatatcggccaaacttactggccagaaatctggcgaccaataaatcacaa
tgcattggtttagtggtgaccaatactctttataatggtaactactttaatgaaatactg
tctcaagcggcaaaaaaattagagaataatggccgtcaattggtactggttgacgggaaa
cacagcgcggaagaagaacaagaagcaatccaattcctgctcgatttacgttgcgatgca
ataataatttacccccggtttttaactgtggatgatatggatgttattattgataaatat
aagcagcctattatggtggtcaacagaaaattaagaaaaaaccacagccactgtattttc
tgcgatcataaagggtccagttataatgcaacaaaatatcttattgaacggggccatcag
gatattgcatttatcaccggctcactggattcaccgacagcgattgagcgcctttctgga
tacaaagaagcattaagagcatgttcgcttccgctgcgggatagcctgattattcaaggg
aaatggaccccgctcagtggtgcaactgcagtagaatcgttattagccagccaacaacca
tttagtgccattatcgccagcaatgatgatatggccattggtgccatgaaaagattaaat
gaggtggggatcaacgtacctgaagccgtatctcttattgggttcgacaatattcccatt
gcgccttttttaagcccatcgttatccagtattaaagacccggtcagcggtatgataaat
gatgtcattaaccggctaatttcaatgttagacggggggtatttatcaactgaaaatata
tttcagtccgaactgattgtcagggactcagtcagtgacgggccctatttaggccaatca
gcgctcaaccatcaataa
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integrated database retrieval system
