Yersinia intermedia: CH53_471
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Entry
CH53_471 CDS
T03608
Symbol
metB
Name
(GenBank) O-succinylhomoserine (thiol)-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
yin
Yersinia intermedia
Pathway
yin00260
Glycine, serine and threonine metabolism
yin00270
Cysteine and methionine metabolism
yin00450
Selenocompound metabolism
yin00670
One carbon pool by folate
yin01100
Metabolic pathways
yin01110
Biosynthesis of secondary metabolites
yin01230
Biosynthesis of amino acids
Module
yin_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CH53_471 (metB)
00270 Cysteine and methionine metabolism
CH53_471 (metB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CH53_471 (metB)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CH53_471 (metB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
yin04147
]
CH53_471 (metB)
Enzymes [BR:
yin01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
CH53_471 (metB)
Exosome [BR:
yin04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CH53_471 (metB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
Met_gamma_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AJJ21357
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All DBs
Position
complement(549952..551112)
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AA seq
386 aa
AA seq
DB search
MSKSKSIATLVIHAGDQVDRGNNAIFPPITTASSFIQPNLGEEGEFCYSRCSNPTRYAYE
TALAELEGGIYATATASGMAATALILELLPKDSHVLVMKGVYGGTYRLFERLRKQTSGTT
FSYVDLNDLASVEHHIQENTGLIWIETPTNPLLELVDIEAVCQVAKSRGIMSCVDNTFAS
AWNQRPLTLGADIVMLSTSKYIGGHSDLIGGAVITNVQDIADQLDFCKTTVGAIASPFDA
YLALRGMKTLDVRMERQCSNALKIAQFLEQHPKVLDVHYPGLESHPQYQLCKKQMRSGGA
VVSIRLKGDITAVKTFIAKLSYFVLAESLGGVESMVNHSASMSHGSMSQEERENIGIYDT
TLRLSIGIEDINDLIADAEQALSFIQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtcaaaatcgatcgcgactctggttatccatgccggagatcaagttgaccga
ggcaataatgctatttttccaccgattactaccgccagttccttcattcagccaaattta
ggcgaagaaggggagttttgttattcccgttgcagtaacccgacaagatatgcatatgaa
accgccttggctgagttggaaggtggtatctatgctacggcaaccgcttccggtatggca
gcaactgcacttatattggagttgctacctaaggattcccatgtattagtaatgaaaggg
gtctatggcggtacttatcggttgtttgaacgtctgcgtaaacaaacttcaggtacgaca
ttcagttatgtcgatcttaatgatttggcgtcagtagagcaccatattcaagagaataca
ggtttaatctggatcgaaacgcccactaacccactgttggaattagttgatattgaagca
gtatgccaggttgccaaaagcaggggcataatgagctgcgtagataatacctttgccagt
gcctggaaccaaaggccactcaccttaggtgctgatatcgttatgctctctaccagtaaa
tatattggtgggcattcagatttaattggcggtgcagttattaccaatgtacaggatatt
gcagatcaattggatttctgtaaaaccaccgttggggctattgcctcgccgtttgatgcc
tatttggcattacgcggtatgaaaacactcgatgtccgtatggaacgtcaatgcagtaac
gctttaaaaattgctcagtttttagagcaacatcctaaggtgctggatgtgcattaccca
ggtctggaatctcatcctcaatatcaattatgtaaaaaacagatgcgttctggcggagcg
gtagtcagtatccggttaaaaggcgatataacagcggtgaaaacctttattgccaaatta
agttattttgttttagccgaatcactggggggcgttgaaagtatggttaaccattctgct
tcaatgtcgcatggctcaatgtctcaagaagagagggaaaatataggcatatacgataca
acactacggctctcaatcggtatcgaagatattaatgatttaatagcagacgcagagcaa
gccctttcctttatacaataa
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