Yersinia intermedia: CH53_635
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Entry
CH53_635 CDS
T03608
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
yin
Yersinia intermedia
Pathway
yin00550
Peptidoglycan biosynthesis
yin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CH53_635 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
yin01003
]
CH53_635 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yin01011
]
CH53_635 (pbpC)
Enzymes [BR:
yin01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
CH53_635 (pbpC)
Glycosyltransferases [BR:
yin01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
CH53_635 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
yin01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
CH53_635 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
GREB1_2nd
Motif
Other DBs
NCBI-ProteinID:
AJJ20557
LinkDB
All DBs
Position
complement(736628..738964)
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AA seq
778 aa
AA seq
DB search
MRKKIYSRYRRMGWALALIMVLFPATLWLADRLWPLPLAEVQVARVVVGEDGTPLWRFAD
ADGVWRYPVTLNQVSPYYLQALLTFEDRWFYSHPGVNPLALARAAWQDLRAGKILSGGST
LSMQVARLIDPHPRTLAGKLRQVWRTFQLEWHFSKERILEIYLNRAPFGGPLQGIGAASW
TYLGKPPSQLTAAEAALLAALPQAPSRLRPDRYPLRAKAARDKVLTRLADYQVWTAKNVA
DIKQEDVWLAPRQMPQLAPLLARRLTSGNQREVIHTTLDTGLQRQLEDMATGWRHQLPEK
TSLGLLVVDHTTMKVRAYLGSVDFQDNSRFGHVDMVSAWRSPGSTLKPFLYAMALDDGLI
HAESLLQDVPRRFGDYRPGNFDTGFHGPVSASEALVRSLNLPAVQLLEAYGPKRFTANLR
NGGLNLRFPSHSEPSLAVILGGTGSRLDQLVAAYSAFARGGVAATLRFEPQQQIQERRLF
SPGAAWITRRIMAGEARPLPDDILPASVPLAWKTGTSYGYRDAWAIGINARYTIGVWVGR
PDGTPVAGQFGYATAIPILNQVNNLLMAGLQQSIRRLPSDPRPSSVSREEICWPGGQPLA
VGDSNCRQRRQSWVLDGTVPPTLAAPGQENMQGSQLNVWLNQQGERVAADCLGAKPALVA
LWPLPLEPWLPLAERRNQRLPAASQQCPPQREASAAPLLILGIRDGAVVKRLPGHNNLDL
RLVAQGGRGQHWWFLNGEQVAVTENNQSWVQSLSVPGGYQLNVLDESGQVGNIMFRME
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaaaaaatctattcccgctatcggcgtatgggctgggcgttagcgcttattatg
gtgttgtttccggccactctttggctggcggataggctttggccattgcctctggctgag
gttcaggtagcgcgggtagtggtaggcgaagatggcacaccgttatggcgttttgctgat
gctgacggcgtatggcgttatccggtgacgttgaatcaagtttcgccgtattatttgcaa
gcactgctcacttttgaagaccgctggttttactcccatcctggggtgaacccattggcg
ctggctcgtgccgcctggcaggatctgcgcgccggtaagatactttcaggtggcagcacg
ttatcgatgcaggttgcccgcttgatcgaccctcatccgcgcacgttagctggcaaattg
cgtcaagtctggcgtacttttcagttggaatggcatttttctaaagaaagaatcctcgag
atctaccttaatcgcgctccatttggtggccccctgcaagggattggtgctgccagttgg
acctatttaggtaagccgccctctcaattaacagcggcagaagccgcgctgctggcagca
ttaccgcaagctcccagccggctacgccccgatcgctatcccctacgggcaaaggctgcc
cgagacaaagtgttaacccggctggcggactatcaggtttggaccgcaaagaatgtggct
gatatcaaacaagaggacgtctggctggcaccacgtcagatgccacaattggctccttta
ctggctcgccgtttaaccagtggtaatcagcgcgaagtgatccacaccacgctggatacc
ggattacagcgccaattggaggatatggctaccggctggcgtcaccaactaccagagaaa
acctcattaggcttgctggtggttgaccataccactatgaaggtgcgcgcttatcttggg
tcggtggattttcaggataatagccgctttggtcatgtggatatggtcagtgcatggcgc
tctccgggatcgacactcaaaccgttcctgtatgccatggcactagatgacggcctgatc
catgctgaatctctgcttcaggacgtgccgcgccgctttggtgattaccggcccggcaat
tttgataccggattccatgggccggtcagtgccagtgaagctctggtgcgttcgctgaat
ttaccggcggttcaattactggaagcctatggcccaaaacgttttaccgccaatttgcgc
aatggtggtctgaacttacgtttcccctctcacagtgaacccagtctggcggtaatttta
ggcggaaccggttcacggttggatcaattggttgccgcgtatagcgcttttgcccgtggc
ggagtggcggcaacactacgctttgaaccgcagcaacaaatacaagagcggcggctattc
tcgccgggagcggcatggattacccggcgcattatggccggtgaagccagaccattaccg
gatgacattttgccagccagcgtaccactggcatggaaaaccggtaccagctacggctat
cgtgatgcttgggctattggcatcaatgcgcgttatacaataggcgtgtgggtggggcgt
ccagatggcactccggttgccgggcagtttggttatgctactgcgataccgatacttaat
caggtcaataacctgttgatggcagggttacagcaaagcattcgcaggttaccgtcagat
ccaaggccatcgtcagtcagtcgggaagagatttgttggccgggtgggcaaccgttggcg
gttggcgatagcaactgtcgacaacggcgtcaaagttgggtgctcgatggtactgtaccg
cccacactggctgcacccggtcaggaaaatatgcagggtagccaactcaatgtgtggtta
aatcagcaaggcgaacgggttgctgcggattgcttaggggccaagccagcgctagtggcc
ctgtggccgttgccactggagccttggttgccactggctgagcgccgcaatcaacggtta
cccgcagcaagccagcaatgcccaccacaaagggaggccagtgccgccccattgctgatt
ttaggtatacgtgacggtgccgttgttaagcgcttacctggccataataaccttgatctg
cgcctggtagcgcaaggcgggagaggtcaacattggtggttcctcaatggggagcaggtg
gcggtgaccgagaataatcagtcatgggtacaaagcttatctgtgccgggcggttatcag
cttaatgtattggatgaaagtggtcaggtgggtaatataatgttccgtatggaatag
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