Yersinia intermedia: CH53_654
Help
Entry
CH53_654 CDS
T03608
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
yin
Yersinia intermedia
Pathway
yin00260
Glycine, serine and threonine metabolism
yin00460
Cyanoamino acid metabolism
yin00630
Glyoxylate and dicarboxylate metabolism
yin00670
One carbon pool by folate
yin00680
Methane metabolism
yin01100
Metabolic pathways
yin01110
Biosynthesis of secondary metabolites
yin01120
Microbial metabolism in diverse environments
yin01200
Carbon metabolism
yin01230
Biosynthesis of amino acids
yin01240
Biosynthesis of cofactors
yin04981
Folate transport and metabolism
Module
yin_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CH53_654 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CH53_654 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CH53_654 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CH53_654 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CH53_654 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CH53_654 (glyA)
Enzymes [BR:
yin01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CH53_654 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AJJ21383
UniProt:
A0A0T9M7B1
LinkDB
All DBs
Position
complement(763082..764335)
Genome browser
AA seq
417 aa
AA seq
DB search
MLKREMNIADYDADLWHAMEQEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKALFGADYANVQPHSGSQANVSVYSALLQPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIVPYGIDESGQIDYEDLARQAEIHKPKMIIGGFSAYSGI
VDWAKMREIADSIGAWFFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL
AKGGDEDLYKKLNSSVFPGNQGGPLMHVIAGKAVALKEAMEPEFKIYQHQVVKNAKAMVS
VFQDRGYKVVSGGTENHLFLLDLVDKDITGKDADAALGRANITVNKNSVPNDPRSPFVTS
GVRIGSPAITRRGFKEAESRELAGWMCDVLDNINDEAVIERVKQKVLAICARLPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattatgatgcagatttatggcatgcaatggag
caagaagtggtgcgccaggaagagcacattgaactgattgcctctgagaactacaccagc
ccgcgcgttatgcaggcgcaaggttctcagttgacgaataaatatgctgaaggttaccca
ggcaagcgttactacggtggttgtgagtacgttgacgttgttgagcaattggctattgat
cgtgctaaagcgctgttcggtgccgattacgccaacgtccagccacattccggttcccag
gcaaacgtctctgtttactctgcattgctgcaacccggtgatactgtattggggatgaat
ctggcccatggcggccacctgacccacggctcaccggttaacttctccggtaaactgtac
aatatcgtgccttacggtatcgatgaatctggtcagattgattatgaagatctggcgcgt
caggccgaaattcataaaccaaaaatgatcatcggtggcttctctgcttattccggtatc
gttgattgggcaaaaatgcgtgaaattgctgacagcatcggcgcatggttctttgtggat
atggctcacgtagcaggtctggttgctgcaggcgtttatcctaacccagttccacatgca
catgtcgttaccactaccacgcacaaaaccctggctggcccacgcggcggcctgattttg
gcgaaaggcggtgatgaagacctgtacaagaaactgaactcttctgttttccctggcaac
cagggtggcccattgatgcatgttattgctggtaaagcagtagcattgaaagaagccatg
gaaccagagttcaaaatttaccagcatcaggtagttaaaaacgccaaagcgatggtgtca
gtgttccaggatcgcggctataaagtggtttctggcggtactgagaaccacctgttcctg
ttggatctggtggataaagatatcaccggtaaagacgccgatgccgccttgggccgtgca
aatattaccgtgaacaaaaacagcgtacctaacgatccgagaagcccgtttgtgacttca
ggcgtgcgtataggtagcccggcaattacccgccgtggcttcaaagaagcggaatctcgc
gaactggctggctggatgtgtgatgtgttggataacatcaatgatgaagcagtcattgag
cgtgtgaaacagaaagtgctggctatctgcgcccgcttaccggtttacgcataa
DBGET
integrated database retrieval system