KEGG   Yersinia intermedia: CH53_680
Entry
CH53_680          CDS       T03608                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
yin  Yersinia intermedia
Pathway
yin03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:yin00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    CH53_680 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:yin03019]
    CH53_680 (rnc)
   03009 Ribosome biogenesis [BR:yin03009]
    CH53_680 (rnc)
   03036 Chromosome and associated proteins [BR:yin03036]
    CH53_680 (rnc)
Enzymes [BR:yin01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     CH53_680 (rnc)
Messenger RNA biogenesis [BR:yin03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CH53_680 (rnc)
Ribosome biogenesis [BR:yin03009]
 Eukaryotic type
  90S particles
   RNase
    CH53_680 (rnc)
 Prokaryotic type
  rRNA processing factors
   CH53_680 (rnc)
Chromosome and associated proteins [BR:yin03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     CH53_680 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM RM44_endonuclase DSRM_2
Other DBs
NCBI-ProteinID: AJJ17705
UniProt: A0A209ACQ5
LinkDB
Position
complement(793269..793949)
AA seq 226 aa
MNPIVINRLQRKLGYTFQQQELLLQALTHRSANSKHNERLEFLGDSILSFVIANELYHRF
PRVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKSGGFRRESILADTVEALI
GGIFLDSDIHMIERLILDWYRSRLDEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGLNEPVIGTGSSRRKAEQAAAEQALKQLELE
NT seq 681 nt   +upstreamnt  +downstreamnt
atgaaccccatcgtaataaacaggctacagcggaagctgggctacacttttcaacagcag
gagctcttgctgcaagcactgactcatcgtagcgccaatagcaaacacaatgagcgtttg
gagttcctgggtgactctatattaagttttgttatcgccaatgagctgtatcaccgtttt
ccccgtgttgatgaaggggatatgagtcggatgcgcgccacattggttagagggaataca
ctcgccgaaatggcccgtgaatttgaccttggtgaatgtttgcgccttgggccgggtgaa
ttgaaaagtggtggtttccgccgtgaatcaattttggcagataccgtcgaagccttaatt
ggcggtatattcctcgatagcgatattcatatgattgaacggctgattctcgactggtat
cgcagtcgcttagatgagatcagcccaggtgataagcagaaagacccaaaaacgcgcttg
caagaatatttgcaaggccgtcatctgccattaccttcttatctggttgtgcaggttcgc
ggtgaagcgcatgaccaggaatttactatccactgccaggtgagtggcttgaatgaaccg
gtaataggtaccggctcaagtcgccgtaaagctgagcaggcggcagcggaacaagcgctg
aaacagttggagcttgaatga

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