Yersinia intermedia: CH53_71
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Entry
CH53_71 CDS
T03608
Name
(GenBank) iclR helix-turn-helix domain protein
KO
K10973
IclR family transcriptional regulator, negative regulator of allantoin and glyoxylate utilization operons
Organism
yin
Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yin03000
]
CH53_71
Transcription factors [BR:
yin03000
]
Prokaryotic type
Helix-turn-helix
IclR family
CH53_71
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Ortholog
Paralog
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GFIT
Motif
Pfam:
IclR_C
HTH_IclR
HTH_5
MarR_2
HTH_24
HTH_20
MarR
Motif
Other DBs
NCBI-ProteinID:
AJJ20527
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All DBs
Position
complement(80921..81739)
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AA seq
272 aa
AA seq
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MTELRRKGRPLQADTSATKGAQALDRGLEILQYLAISGGSATVSILSDKLALPLSTTFRL
LKVLEKSEFVFQDPQLGWWHIGIQSFTVGSAYMNDLDVVSIAGPYMRRLMRLSGETANLA
IRNNMDAVLIRQCECQAMVRMCAPLGSRLPLHASGAGKALLYPLAEDERLDLIVNAGLQS
YTPKTITSLNMLEKDLLLARENGYTVDDEEHALGLNCVASAIFDRNNDVIAAISISGPSS
RMSEDRFTELGELVRDVANDISAALGESRKKA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgactgaattacgcagaaagggcaggccgttgcaagctgataccagtgctactaaagga
gcacaagcattggatcgggggcttgaaattttgcagtatctggcaatctcgggtggtagt
gcgaccgtttccatcttgtctgacaaactggcgctaccgctttcgaccacattcaggtta
ttgaaggttcttgagaagtcggagttcgtatttcaagatccgcagcttggttggtggcac
attggcattcagtctttcactgtcggatcagcttatatgaatgaccttgatgtggtgtca
atagccgggccgtacatgcgacgcctgatgcgcttatcaggtgaaaccgctaatttagcg
atccgtaataatatggatgcagtacttattcggcagtgcgaatgccaggcgatggtgcga
atgtgtgctccactagggagtcgcctaccactgcatgcctccggcgctggtaaggcccta
ttgtatccgctagcggaagatgaacggctggatcttattgtgaatgcgggcttgcagtct
tatacgcccaaaacgattactagcctgaatatgttggaaaaagatctgctattggcgcgt
gagaatgggtataccgttgatgatgaagagcatgctttagggctgaactgtgtcgcttca
gcaatctttgatcgtaacaacgatgtgattgcggccatttcaatttcagggccaagttcg
cggatgagtgaggatagatttacggagttaggtgagctagtacgcgatgttgctaacgac
atcagcgctgctcttggagagtcacgcaagaaggcttag
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