Yersinia intermedia: CH53_809
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Entry
CH53_809 CDS
T03608
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
yin
Yersinia intermedia
Pathway
yin02024
Quorum sensing
yin03060
Protein export
yin03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CH53_809 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CH53_809 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CH53_809 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
yin02044
]
CH53_809 (ffh)
Enzymes [BR:
yin01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
CH53_809 (ffh)
Secretion system [BR:
yin02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CH53_809 (ffh)
Eukaryotic Sec-SRP protein
CH53_809 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
cobW
AAA_31
AAA_30
AAA_24
KTI12
AAA_33
Fe-ADH
YqeC
APS_kinase
VirC1
AAA_19
AAA_14
Fe-ADH_2
AAA_16
ABC_tran
TsaE
ArsA_ATPase
DUF5407
Motif
Other DBs
NCBI-ProteinID:
AJJ20402
UniProt:
A0A0T9LM30
LinkDB
All DBs
Position
complement(918795..920156)
Genome browser
AA seq
453 aa
AA seq
DB search
MFENLTDRLSRTLRNISGRGRLTEENIKETLREVRMALLEADVALPVVRDFINRVKERAV
GHEVNKSLTPGQEFVKIVKNELIAAMGEVNNELNLAAQPPAVVLMAGLQGAGKTTSVAKL
GKFLKEKQKKKVLVVSADVYRPAAIKQLETLAQGVDIDFFPSDVQEKPIDIVNRALQQAK
LKFYDVLIVDTAGRLHVDEAMMDEIKQIHAAINPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKSDALEPFHPDRVASRILGMGDV
LSLIEDIESKVDRAQAEKLATKLKKGDGFDLNDFLDQLKQMRNMGGMASMLSKMPGAGQL
PENVKSQMDDKVTVRMEAIINSMTLKERAKPEIIKGSRKRRIATGSGVQVQDVNRLLKQF
DEMQRMMKKMKNGGLAKMMRGMKGMMPPGFPGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaacttaactgatcgattgtcgcgcacattgcgcaatatcagcggccgtggc
cggctgacagaagaaaatattaaagaaacgctgcgtgaagttcgcatggcgttactggaa
gctgacgtagccctgccggtggttcgtgactttatcaaccgggtaaaagagcgcgctgtc
gggcatgaggtgaataaaagcctcacgccaggccaagaattcgtcaaaatagttaaaaat
gaacttatcgccgccatgggcgaggtcaataacgaactgaatctggccgctcaaccgcca
gcagtggtgttaatggcgggtctgcaaggggcgggtaaaaccaccagtgtggccaaactg
ggtaagttccttaaagaaaaacagaagaaaaaagtgctggttgtgtctgccgacgtgtat
cgccctgcggcgatcaaacagttggagacgctggcacagggtgttgatattgatttcttc
ccgtctgatgtacaagaaaagccgattgatattgttaatcgtgctctgcaacaggcaaaa
ctcaagttttatgatgttctgattgtcgataccgccggtcgcttgcacgtcgatgaagcg
atgatggacgagatcaaacagattcatgccgcgattaatccggttgaaaccttgtttgtt
gtcgatgcaatgaccgggcaggatgctgctaacacggcgaaagcattcaacgaagcgttg
ccgctcaccggtgtggtgctgactaaagttgatggtgatgcccgtggtggtgcggctctg
tctatccgccatattaccggcaagccgatcaaattcttgggcgtgggcgaaaagtctgat
gccctggagccgttccacccggatcgcgtggcttcacgcattctggggatgggcgacgtg
ctgtcgctgattgaagatatcgaaagtaaagttgaccgtgcacaagcggagaaactggcc
accaagctgaaaaaaggtgatggtttcgatctcaacgacttccttgatcagttgaagcaa
atgcgcaatatgggcggtatggccagcatgttgagtaaaatgccgggtgctggtcagttg
ccagaaaacgtgaaatcacagatggacgataaggtgacggttcgtatggaggccatcatc
aattcgatgacgctgaaagaacgtgctaaaccagagatcatcaaaggctcgcgtaagcgc
cgtattgctaccggttctggcgtgcaggtgcaggatgttaaccgcttacttaagcagttt
gatgaaatgcagcgcatgatgaagaaaatgaaaaatggtggcttggctaaaatgatgcgt
ggcatgaagggtatgatgccaccgggtttcccaggccgctaa
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