Yersinia intermedia: CH53_924
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Entry
CH53_924 CDS
T03608
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
yin
Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yin03021
]
CH53_924 (rpoS)
Transcription machinery [BR:
yin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CH53_924 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AJJ17680
UniProt:
A0A0T9LKU3
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All DBs
Position
complement(1044831..1045829)
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AA seq
332 aa
AA seq
DB search
MSQNTLKVNELHEDADFDENSTETEIFDEKALVEDEPTESELADDELLAQGVTQRVLDAT
QLYLGEIGYSPLLTAEEEVYFARRALRGDVPSRRRMIESNLRLVVKIARRYSNRGLALLD
LIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVY
LRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDIL
SDENENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLT
RERVRQIQVEGLRRLREILQTQGLSIEALFRE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaatacgctgaaagttaacgagttgcatgaagatgctgattttgatgaaaac
agtacggaaactgaaattttcgatgaaaaagcattagtagaagatgaacctactgaaagc
gagttagcagatgatgagctgttggcgcaaggtgttacccagcgagtgctggacgcgacg
cagctctatcttggtgagattggttattcgccgctgttaaccgcagaagaagaggtttat
tttgcccggcgtgcattgcgcggagatgtgccttcacgtcggcgtatgattgaaagtaac
ttgcggttggtggtgaagatcgcccgccgttacagtaatcgcggtttagcgctgctggat
ttgattgaagagggtaaccttggtcttatccgtgcggtggaaaagtttgaccctgaacgc
ggtttccgtttctccacctatgccacttggtggattcgtcaaacgattgaacgggcgata
atgaaccaaacccggactatccgtttacctatccatattgttaaagaattaaacgtttat
ttgcgtactgcacgagaactctctcataaattggatcatgaaccgagcgctgaagagatt
gccgagcaactcgacaaaccggttgatgacgtgagccgtatgttacgcctgaacgagcgt
atcacttctgttgatacaccgttaggcggcgactcagagaaagccttgttagatattctg
tctgacgaaaatgaaaatggtccagaagatacaacgcaagatgacgatatgaagcaaagt
atcgttaaatggctgtttgaattgaatgctaaacagcgcgaagtgctggcccgtcgtttt
ggtcttttaggatatgaagcagcaacactggaagatgttggccgtgaaattggtttgacg
cgcgaacgtgtccgccagattcaggttgaaggcttacgtcgtttgcgtgaaattctgcaa
acacaaggcttgagtatcgaggcgttgttccgcgaataa
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