Yersinia intermedia: CH53_953
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Entry
CH53_953 CDS
T03608
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
yin
Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yin03009
]
CH53_953 (rumA)
Enzymes [BR:
yin01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CH53_953 (rumA)
Ribosome biogenesis [BR:
yin03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CH53_953 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
PCMT
RrnaAD
MTS
TRM5-TYW2_MTfase
Methyltransf_11
Cons_hypoth95
Methyltransf_15
Methyltransf_23
TPMT
Ubie_methyltran
Methyltransf_4
FtsJ
Motif
Other DBs
NCBI-ProteinID:
AJJ19960
LinkDB
All DBs
Position
complement(1074905..1076236)
Genome browser
AA seq
443 aa
AA seq
DB search
MAQFYSPNRRVTTRQTITVTVNSLDPFGQGVAREKGKAIFIPGVLPGEQAEIELIEQKRQ
YSRGKLKHLLNQCSERVTPPCPHFGICGGCQQQHACSQLQQDSKADSLRRLLVNATGACP
ALGPVICGPEYGYRRRARLGLLYQPKQQRLQMGFHQTESHDLVSVKHCPVLLPELERLLQ
PLYQCLSALQAVRRLGHVELVLADNGPLLVLRHLDTLNDVDRAALTDFAQRERVAIYLAA
DSENLEKLVGEDPYYQIDGLRLAFHPRDFIQVNDTVNQQMVAQALAWLDVQPDERVLDLF
CGMGNFTLPLAKRAREVVGVEGVAELVANGQYNAQSNALANVSFFHENLESDISRQPWAT
QGFDKVLLDPARAGAAGVMSHIVKLAPKRVVYVSCNPTTLARDSQVLLAAGYRLAQVRML
DMFPHTGHLESMALFMQEPGVAK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctccaaaccgacgtgtgacgacccgacaaacgataactgtgaca
gtaaattctcttgatccctttggtcagggggttgcacgcgagaaaggcaaagctattttt
atccctggggttctaccgggggagcaagctgaaattgagctgatcgagcaaaaacgccag
tatagtcgcggtaaacttaaacatttgttgaaccaatgcagcgaaagagtgactcctcct
tgccctcactttggaatttgtggaggctgtcagcagcagcacgcttgtagccagttacag
caagatagcaaagcagattcgctcaggcggctgcttgttaacgcgacgggggcttgccct
gcattaggcccggttatctgtgggccagagtatggttatcggcggcgagcgaggttgggt
ttactctatcaacccaaacagcagcgattgcaaatgggtttccatcaaaccgaatctcac
gacttggttagtgtaaagcactgccctgtcttactgcctgaattggaacgactgctacag
ccgctttatcagtgcttatctgccttgcaggctgtgcgccggttagggcatgtggaactg
gtgctggctgataatgggccgttgctggttttacgtcaccttgatacccttaatgacgta
gatcgcgcagcgctaactgattttgcccagcgggaacgggttgccatctatctggccgct
gacagcgagaatctggaaaaactcgttggtgaggatccctattaccaaatagacggtcta
cgcttagcatttcatccacgggattttattcaggttaatgatacggtcaaccaacaaatg
gtggcccaggctctggcatggcttgatgtacaacctgacgagcgggtactggatctcttc
tgcggtatgggtaatttcacgttgccgttggcaaagcgtgcgcgtgaggttgtcggggtg
gaaggagttgcggagctggtggcgaatgggcagtataatgcgcagagcaatgcattagcc
aacgtgtcatttttccatgaaaatcttgaatccgacatcagccgccagccgtgggcgaca
caaggattcgataaagtattattagaccccgctcgcgcaggtgctgccggggtgatgtca
catatagtcaaactggcgccaaagcgggtggtgtatgtttcgtgtaatcccactacgctg
gcacgggatagtcaggtgttgttagccgccggttaccgtcttgctcaggtgcgaatgttg
gatatgtttccccacaccgggcatcttgaatctatggcgctgttcatgcaggagccaggg
gtcgcaaagtag
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