KEGG   Yersinia kristensenii: HRD70_01010
Entry
HRD70_01010       CDS       T08672                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
yki  Yersinia kristensenii
Brite
KEGG Orthology (KO) [BR:yki00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:yki02044]
    HRD70_01010 (tssC)
Secretion system [BR:yki02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HRD70_01010 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QKJ13897
LinkDB
Position
complement(231461..233014)
AA seq 517 aa
MLMSVQENTAQGSATTILEKNNAVAQGVYASLFEKINLSPVSSLTGLDAFQNNDAMADAT
TDERVTAAVSVFLDLLKQSAKKVEKLDKTLLDGHIAALDDQISRQLDAVMHHPDFQRVES
TWRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEIVQSGLYAQTYIQEYDTPGGE
PIAAAISNYEFDRSPQDIALLRNISKVAAAAHMPFIGSVGPEFFGKESMEEVAAIKDIAN
YFDRAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHDRYL
WTNASFAFAANMVKSFIKNGWCVQIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPE
TREFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTADATANSRINARLPYIFLLSR
IAHYLKLIQRENIGTTKDRRLLELELNNWIRTLVTEMTDPGDDLQASHPLRDAKVTVEDI
EDNPGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA
NT seq 1554 nt   +upstreamnt  +downstreamnt
atgctgatgtctgtacaggaaaatactgcgcagggtagtgcgacgaccattttagaaaag
aataacgctgtagcccaaggggtttacgcctctttgtttgaaaaaatcaacctcagcccg
gtatcttcactgaccggtcttgatgctttccagaataacgatgccatggcggatgcaacc
accgatgagcgcgtcactgccgccgttagtgtctttttagacctgttaaagcaatcggcg
aaaaaagtggaaaagctggataaaaccttgctggatggccacattgcggcactggatgac
caaattagtcgccagttagatgcagtcatgcaccaccccgatttccaacgagtggaatcc
acctggcgcggcgtgaaatcccttattgatcaaactgatttccgtcaaaatgttcgcatt
gaattactggatatcagtaaagatcatctggtgcaggattttgaagatgcgcctgaaatc
gtgcaaagcgggttatacgctcagacctatattcaggaatatgatactcctggcggcgag
cctattgcagcggctatctccaactacgaatttgaccgtagcccacaggatatcgcgcta
ttgcgtaatatctccaaagtggcggcggcggcccatatgccgtttatcggttcagttggc
cctgagttctttggtaaagaaagcatggaagaagtggcggcgattaaagatatcgctaac
tattttgaccgcgccgaatacatcaagtggaaagctttccgcgactctgatgactcacgc
tatatcggcttgaccatgccacgcgtgctagggcgcttaccttatgggccagacaccgtt
cctgtgcgcagcttcaactacgttgagcaggtgaaagggccggatcacgatcgctacttg
tggaccaacgcttcatttgcttttgctgccaacatggtgaaaagcttcattaaaaatggc
tggtgcgtacagattcgtggtccacaagccggtggtgccgtcactaatctgcctattcac
ttgtacgatttgggcaccggtaatcaggttaagattccgtcagaagtgatgatcccggaa
acccgcgagttcgagttcgctaatctgggctttatcccgctgtcatactacaaaaaccgt
gattattcctgcttcttctcggctaactcggcgcagaaaccggcgctgtatgacaccgcg
gatgccaccgccaacagccgtattaacgcccgtctgccgtatatcttcctgctgtcgcgc
attgctcattatctgaagttgattcagcgcgagaacatcggcaccaccaaagaccgccgt
ctgttggagctggaactgaataactggatccgcacgttggtcactgaaatgactgatcca
ggtgatgatttgcaggcttcccatccactgcgtgatgcgaaagtgacggtcgaagatatt
gaagacaacccaggtttcttccgcgtcaaactgtatgccgtgccgcatttccaggtggaa
ggcatggatgtgaatctgtcattagtctcgcagatgccgaaggctaaggcataa

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