Yersinia kristensenii: HRD70_03705
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Entry
HRD70_03705 CDS
T08672
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
yki
Yersinia kristensenii
Pathway
yki00040
Pentose and glucuronate interconversions
yki01100
Metabolic pathways
yki02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yki00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HRD70_03705
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HRD70_03705
Enzymes [BR:
yki01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
HRD70_03705
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Motif
Pfam:
Pectate_lyase_2
Motif
Other DBs
NCBI-ProteinID:
QKJ14360
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Position
complement(852105..853823)
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AA seq
572 aa
AA seq
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MKKRALFLSMAALATLYIPAGQAADTDRLTVVKQYVDNVLNKASDTYHGDKPSPLLADGV
DPRTGQQLEWVFPDGRRAVLSNFSAQQNLMRVMSGLSQLSGDPRYQKRAEDIVRYHFQNY
QDPSGLLYWGGHRFVDLKTLQPEGPSEKEMVHELKNAYPYYDLMFSVDSDATARFIRGFW
NAHVYDWRILETSRHGEYGKPMGALWESKFEQQPPFFATKGLSFLNAGNDLIYSASLLSK
HQQEPGALVWAKRLADQYVLPRDAKTGLGVYQFTQALKREEPTDDADTHSKFGDRAQRQF
GPEFGPAALEGNMMLKGRTSTLYSENALMQLQLGKDLGPQGQDLLKWTVDGLKAFAKYAY
NDQDNTFRPMIADGQDLSNYTLPRDGYYGKKGTVLKPYKAGNEFLISYARAYAIDNDPLL
WKVARGIANDQGLGDIGTAPGKDVKVKMDTTNSDPYALFALLDLYQASQVADYRLLAEKI
GDNIIKTRYIDGFFMVSPDRQYADVDAIEPYALLALEASLRNKPQAVAPFLNGAGFTEGA
YRMDDGSSRISTRDNELFLLNVGEKLQPNGRK
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagagcgttatttttgagtatggcagcgctagccacgttgtatattcccgcc
ggacaggcagcggatactgaccgcctgacggtggtaaaacagtatgtcgacaatgtgcta
aataaagcatccgatacctatcacggtgataagccgagcccgttattggcggatggtgtt
gacccccgaaccgggcagcaactggaatgggtattccctgatggccgccgggcagtatta
tcaaatttctcagcacaacaaaatctcatgcgcgtcatgagtggtttgagccagcttagc
ggtgatccccgctatcagaaacgcgccgaagatattgttcgttatcacttccagaattat
caagacccaagtggtttgctgtattggggcggtcaccggtttgttgatctgaaaaccctt
caaccagaagggccaagtgaaaaagagatggtgcatgagctgaaaaatgcttatccctat
tatgacctgatgtttagcgtcgacagtgatgccaccgcgcggtttatccgtggcttttgg
aatgcccatgtttatgattggcgtattcttgaaaccagccgccacggtgaatatggcaag
ccgatgggcgcactgtgggaaagcaagtttgagcagcagccacctttctttgctaccaaa
gggctgagcttcctcaatgcgggcaatgacctgatttattctgcgtccttgctctccaaa
caccagcaggagcccggcgcattagtctgggccaaacgcctggcagatcagtatgtttta
ccgcgtgatgccaaaacgggccttggtgtttatcagtttacacaagctctcaaacgcgag
gagccaacggatgatgccgatacccattctaagtttggtgatcgcgctcaacgccagttt
gggccggagttcggcccggcagcactggaaggcaacatgatgctcaaagggcgcaccagc
accctttattctgaaaatgccttgatgcagttgcagttgggtaaagatttggggcctcag
gggcaggacttgctgaaatggacggtggatggtctgaaagcctttgccaaatatgcctat
aacgatcaagacaataccttccgtccgatgattgccgatgggcaggatttatccaattac
accctcccacgtgatggttattacggtaaaaaaggcaccgtgctcaaaccatacaaagca
ggtaatgaattcctgatttcttatgcgcgtgcttatgccattgataatgatccattactg
tggaaagtggcgcgcggcattgccaacgaccaggggctgggtgatatcggtactgcgccg
ggcaaagatgtaaaagtgaagatggacaccaccaacagtgatccttacgcgttgtttgct
ttgttggatctctaccaggccagccaggtagcagattatcggctactggcagagaaaatc
ggcgataacatcatcaaaacacgttatatcgacggtttcttcatggtttctcctgatcgc
caatatgccgatgttgatgccatagaaccttatgctctgctggctctggaagcatcattg
cgcaataaaccccaggctgtggcacctttcctgaatggtgcaggctttactgagggggcc
taccgcatggacgacggttcgtcgcggatctcaacccgtgataatgaactgttcttgctc
aatgtgggcgagaagctacaaccgaacggccgtaaatag
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