Yersinia kristensenii: HRD70_04595
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Entry
HRD70_04595 CDS
T08672
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
yki
Yersinia kristensenii
Pathway
yki03030
DNA replication
yki03410
Base excision repair
yki03420
Nucleotide excision repair
yki03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HRD70_04595 (polA)
03410 Base excision repair
HRD70_04595 (polA)
03420 Nucleotide excision repair
HRD70_04595 (polA)
03440 Homologous recombination
HRD70_04595 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yki03032
]
HRD70_04595 (polA)
03400 DNA repair and recombination proteins [BR:
yki03400
]
HRD70_04595 (polA)
Enzymes [BR:
yki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HRD70_04595 (polA)
DNA replication proteins [BR:
yki03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HRD70_04595 (polA)
DNA repair and recombination proteins [BR:
yki03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HRD70_04595 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HRD70_04595 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Prok-E2_E
HHH_5
DUF2529
Obc1_cap
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QKJ14523
LinkDB
All DBs
Position
1064138..1066936
Genome browser
AA seq
932 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNGSGEPTGAMYGVLNMLRSLLLQYRPSHVAV
VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHQMVKAMGLPLLVVSGVEADDVIGT
LAQEAEKAGHAVLISTGDKDMAQLVTPNITLINTMNNAILGPQEVCEKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDALFSNLDKISSLTFRGAKTMSAKLEQNK
DVAYLSYKLATIKTDVELDVTCDELKVTAPDDDQLYQLFSRYEFKRWLVDVEAGKWLEGK
KDRPAAQSSSKAFVAAESAPAVEVTAVLSQENYQTILDEKSLSDWIERLKSAEVFAFDTE
TDGLDTLSSNLIGFSFAVAPGEAAYLPVAHDYLDAPTQLDRNWVLAQLKPLLEDEKALKV
GQNLKFDQSMLARYDIELRGIAFDTMLESYVLDSVAGRHDMDSLAERYLNHKTITFEEIA
GKGKNQLTFNQIALEQAGPYAAEDADVTLQLHLVLWPKLQQSEGLKRVFQEIEMPLLPIL
SRIERTGVLIDQNILAAHSKELTIRLDELEKQAHELAEEPFNLASPKQLQAILYEKQKLP
ILKKTPGGAASTNEEVLAELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPVSGRVHT
SYHQAVTATGRLSSRDPNLQNIPVRNEEGRRIRQAFIAPKGYRIMAADYSQIELRIMAHL
SQDQGLLTAFAAGKDIHRATAAEVFGLPLEKVTNDQRRSAKAINFGLIYGMSAFGLARQL
NIPRGEAQRYMDLYFERYPGVLEYMERTRKQAAEQGYVTTLDGRRLYLPDIHSRNATRRK
AAEREAINAPMQGTAADIIKRAMIAVDAWLQQEPEPLVRVIMQVHDELVFEVHESVLESA
EQKIRELMEQSMQLAVPLKVDVGVGDNWDQAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattgcagaaaacccattgatcctcgttgacggttcctcttacctctatcgt
gcttaccatgctttcccgccactgaccaacggcagcggtgagccaacgggcgcgatgtat
ggcgtgttgaacatgttgcgcagtctgttgctgcaatatcgtccaagccatgtagctgtc
gtttttgatgctaaaggtaaaacattccgcgatgagcttttcgcagaatataagtctcac
cgaccacctatgccggatgatttacgcgctcaaattgagccacttcaccaaatggttaag
gcgatggggctacctttattggtcgtctctggcgttgaggctgacgatgttattggcact
ttggcacaagaagctgaaaaagcaggtcatgctgtattaattagtactggtgataaagat
atggcgcaattagttacgccgaatatcactctcatcaatacaatgaataacgctatttta
gggccacaggaagtgtgcgaaaaatatggcgttccccctgagctgattattgattttctc
gccctaatgggggattcctcagataatattcccggagtgccgggcgttggtgagaaaact
gcacaggctttattacaaggtctgggtggattggatgcgctattcagtaatttggataaa
atatcctcgctaacattccgtggtgcgaaaacgatgtcagctaaattggagcagaataaa
gatgttgcttatctctcctataaattagccacgattaaaacggatgttgaactggatgtg
acttgtgatgagctgaaagtcactgcgccagatgatgatcagttatatcaattattcagc
cgctatgaatttaagcgctggctggtggatgtcgaagcaggaaaatggctggaaggtaaa
aaagaccggccagcagcgcagagcagcagtaaagccttcgtggcagcagaatcagcccct
gcggttgaagttactgctgtgctctcacaagaaaattatcaaaccatcttggatgagaaa
tctttaagcgactggattgaacggcttaaaagcgcggaggtttttgcttttgatactgaa
actgacggccttgatacccttagcagtaatttaattggtttttcttttgccgtagcaccg
ggtgaagcggcttatttgcctgtagctcatgattatctggatgcccctactcagctggat
agaaattgggttctggcccagcttaaacccttactggaagatgaaaaggccctgaaagtc
gggcagaatcttaagtttgaccaaagcatgttggcgcgttatgacattgagctgcgtggt
attgctttcgatactatgctggaatcttatgttttagacagtgttgctggccgacatgat
atggatagcttggcggagcgctatctgaatcataagaccattacctttgaagagattgcc
ggcaaaggcaaaaatcaactcactttcaaccaaattgcgttagagcaagctgggccttat
gcggcagaagatgcagatgtcaccttacagttgcatttagtgttgtggcctaaactacaa
caaagtgaggggctaaagcgggtattccaagaaattgagatgccgctgctaccaatattg
tcccgtattgagcggactggtgtattgattgaccagaatatattggcagcacactccaaa
gagctgactattcgtcttgatgagttggaaaaacaagctcatgaattggctgaagagcct
ttcaatctcgcctcacctaagcagctacaggccattttgtatgaaaaacaaaaattgcct
atcttgaagaaaacacctggaggcgcagcttcaaccaacgaagaggtgctggctgagttg
gcgctggattaccctctgccgaaagtgattcttgagtatcgtggcttggcgaagctgaaa
agtacttataccgataaattgccgttgatgattaacccggtttctgggcgagttcatact
tcttatcatcaggctgtcacggcgactgggcgtttatcctcccgtgatcctaacctgcaa
aacattccggtgcgaaatgaagaagggcgtcgtatacgtcaggcttttattgcgcccaaa
ggttaccgcatcatggcggcggactactcacagattgagttgcgcatcatggcccatttg
tcgcaagaccaagggttgttgactgcatttgctgccgggaaggatatccaccgcgcgacg
gcggctgaagtctttggtttgccattggaaaaagtgacaaacgaccaacgccgtagtgct
aaagccattaactttggcttgatttatggcatgagcgcatttggtttggcgcggcaactg
aatattcctcgtggggaagcacagcgctatatggatctctattttgagcgctacccaggt
gtgctggaatatatggaacgcacgcgcaagcaggccgctgagcaaggttatgtcacgacc
ttggatggtcgtcgtctctatctacctgatattcattcacgcaatgctacgcgccgtaag
gcagctgaacgtgaagctatcaatgcgccgatgcaaggcactgccgctgatattattaag
cgcgcaatgattgcagtcgatgcctggttacagcaagaacctgagcctttggtgcgggtc
atcatgcaggtacacgatgaattggtgtttgaggtgcatgaaagtgtattagaaagcgct
gagcagaaaattcgtgagttgatggaacagagtatgcaactggcggtgccattaaaagtg
gatgtcggtgtgggtgataactgggatcaagcgcactaa
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