Yersinia kristensenii: HRD70_04850
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Entry
HRD70_04850 CDS
T08672
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
yki
Yersinia kristensenii
Pathway
yki03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HRD70_04850 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yki03400
]
HRD70_04850 (mutM)
Enzymes [BR:
yki01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HRD70_04850 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HRD70_04850 (mutM)
DNA repair and recombination proteins [BR:
yki03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HRD70_04850 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
zinc-ribbons_6
Sugar-bind
RNA_POL_M_15KD
Zn_Tnp_IS1595
Motif
Other DBs
NCBI-ProteinID:
QKJ14572
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All DBs
Position
1119118..1119927
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AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILALSDQQVLSVQRRAKYLL
IELKTGWIIVHLGMSGSLRILSEETEAEKHDHVDLVISNGKILRYTDPRRFGAWLWAKDL
ETSSVLAHLGPEPLSNEFTAEYLFEKSRNKRTVVKQWLMDNKVVVGVGNIYASESLFTAG
ILPERAAGSLTEAEVTQLVATIKAVLLHSIEQGGTTLRDFLQSDGKPGYFAQELQVYGRA
GELCRRCGNVIEIAKHGQRSTFFCRHCQH
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaagttgaaaccagccgacgcgggatcgaaccttatcttgtcggc
cagactattctttatgcggtggtcagaaatgcccgcttacgctggccagtgtctgatgaa
atcctggcactcagtgaccagcaggtactcagtgtccaacgccgagctaaatatttactg
atagagctgaaaacaggctggattatcgtccatctagggatgtcaggtagcttgcgcatt
ttgtcggaagaaaccgaagcggaaaaacatgatcacgtcgatttggttatcagcaatggc
aaaatcctgcgttataccgatccgcgccgttttggtgcctggttatgggcaaaagacctt
gaaaccagtagcgtactcgcacacttagggccagaacctctgagtaatgaatttaccgct
gagtatctgtttgaaaagtcacgtaacaaacgtacggtagtgaaacagtggctaatggat
aataaagtggtagtcggggtgggtaacatctatgccagtgaatcgctattcactgcgggt
attctgccggagcgcgcagctggttcattaaccgaagccgaggtcacgcagttggtggca
acaatcaaagccgtgttattgcactctattgagcagggtggtactacattgcgcgacttt
ttacagtcagatggcaaaccgggttattttgcgcaagaattacaggtatatgggcgggca
ggtgagttatgtcggcgctgtggcaatgtgattgaaattgctaagcatgggcagcgtagc
acgtttttttgccgccactgccagcattaa
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