Yersinia kristensenii: HRD70_05905
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Entry
HRD70_05905 CDS
T08672
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
yki
Yersinia kristensenii
Pathway
yki00071
Fatty acid degradation
yki00280
Valine, leucine and isoleucine degradation
yki00310
Lysine degradation
yki00362
Benzoate degradation
yki00380
Tryptophan metabolism
yki00410
beta-Alanine metabolism
yki00640
Propanoate metabolism
yki00650
Butanoate metabolism
yki00907
Pinene, camphor and geraniol degradation
yki00930
Caprolactam degradation
yki01100
Metabolic pathways
yki01110
Biosynthesis of secondary metabolites
yki01120
Microbial metabolism in diverse environments
yki01200
Carbon metabolism
yki01212
Fatty acid metabolism
Module
yki_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
yki00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HRD70_05905 (fadB)
00650 Butanoate metabolism
HRD70_05905 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
HRD70_05905 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HRD70_05905 (fadB)
00310 Lysine degradation
HRD70_05905 (fadB)
00380 Tryptophan metabolism
HRD70_05905 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HRD70_05905 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HRD70_05905 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HRD70_05905 (fadB)
00930 Caprolactam degradation
HRD70_05905 (fadB)
Enzymes [BR:
yki01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HRD70_05905 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HRD70_05905 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HRD70_05905 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
HRD70_05905 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
QKJ14751
LinkDB
All DBs
Position
complement(1352901..1355090)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQSETLKLHWLENGIAELVFEAPGSVNKLDTKTVANLGEALIVLENQSELKGLLLRST
KAAFIVGADITEFLSLFNAPPEKLHQWLVFANDIFNRLEDLPVPTISAINGYALGGGCEC
ILATDFRVASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDIIAKDALK
VGLIDAVVAPEKLADAALTMLKQAIDGKLDWKAARLPKLEPLKLNPTEAAMCFTIAKGMV
MQVAGKHYPAPLTAVKTIEAAAKLGRTEALKLETTSFVRLAGSNEARALVGIFLNDQYVK
GQAKKLSKGVSAPKQAAVLGAGIMGGGIAYQSALKGVPVIMKDINEKSLTLGMNEAAKLL
NKQLERGKVDGLKMANILATIQPTLDYTGIERAQVIVEAVVENPKVKAAVLAEVETLIGE
ETVLASNTSTIPIDMLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGAKTSDKTIAAVVAY
ATQMGKTPVVVNDCPGFFVNRVLFPYLAGFGMLLRDGADFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPERMNKDYRDAVDVMFDNQRFGQKNGQGFYRYTQDAKGKP
RKENDEKVDELLAQVIQSVQQFSDEDIIARTMIPMINEVVRCLEEGIIASPAEGDMALVY
GIGFPPFHGGVFRYLDTIGSANYVEMAQRYAHLGPLYHVPVGLRAKAEHNESYYPVATAL
PDISTSQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaagcgaaacattaaagcttcattggctggaaaacggcatagcagagttg
gtgtttgaagcaccgggctcagttaataaactggatactaaaactgtagccaatctgggt
gaagccttgattgtgttggaaaaccaaagcgaactcaaagggttgctgttgcgctccacc
aaggcagcctttattgtcggtgctgatatcactgagtttctgtccctgtttaatgcccca
ccagaaaagttgcatcaatggttggtgttcgccaacgacatttttaaccgtttggaagat
ttaccggtaccgaccatatctgcgatcaacggatatgcgctgggtggcgggtgcgaatgt
attctggctacagatttccgcgtggcttcaccagaagcacgtatcggcctaccggaaacc
aagctcggaatcatgccgggttttggcggttcagttcgcttaccacgactattaggcgct
gacagtgcgttggaaattatcgcggctggcaaagatattattgctaaagatgctttaaaa
gttggcctgattgatgctgtcgtcgcccctgagaaactggctgatgcagctttaaccatg
ttgaaacaggctattgacggtaaacttgactggaaagccgctcgcctccccaaattggag
ccgctgaaactcaatcctaccgaagccgctatgtgctttaccattgctaaaggcatggtc
atgcaagtcgctggtaaacactatccggctcccctgaccgccgtcaaaaccattgaggcc
gccgcaaaacttggccgaaccgaagcattgaaattagaaaccaccagttttgtccgttta
gccggatccaatgaagcacgggcattagtcggtattttcctaaatgatcaatatgttaaa
gggcaggctaaaaaactgtccaaaggtgttagcgcaccaaaacaagcggcagtgctgggt
gcggggattatgggcggtggaattgcctatcaatcagcactaaaaggtgtgccggtcatt
atgaaagatattaatgaaaaatccctgacactagggatgaatgaggcggccaagttactg
aataaacagttggaacgcggcaaagtggatggcctgaaaatggcgaatatcttagcgacc
atccagccaacacttgattacaccggtattgaacgcgcccaagtcatcgtggaagcggtg
gtggaaaatcctaaagtaaaagcggcagtactggctgaagttgaaacattgatcggcgaa
gaaactgttttggcctctaatacctccacaattccgatcgatatgctcgctaaatccctt
aaacgcccggaaaatttctgtggcatgcacttcttcaacccagttcatcgtatgccgctg
gttgaaattattcgtggtgcgaaaacctcagataaaactatcgctgccgtagtggcatac
gccacgcaaatgggtaaaaccccggttgtggtaaatgattgcccaggtttctttgttaac
cgtgttttattcccgtatctagctgggtttggcatgttactgagagacggcgcggacttc
cgccaaattgataaagtgatggaaaaacaatttggctggccaatgggtcccgcctatcta
ttagatgtggtcggcattgataccgcacaccatgcacaagccgtaatggcggctggcttc
ccggaacgtatgaataaagattatcgcgatgcggttgacgtgatgttcgataaccaacga
tttggtcagaagaatggccaaggtttctaccgttatactcaagatgccaaaggcaaaccg
cgtaaagaaaatgatgagaaagtggatgagttactagcacaagtcattcaatcagttcag
caatttagcgatgaagacattattgcccgcaccatgatcccgatgatcaatgaagtcgtg
cgatgtctggaagaaggtattattgccagcccagctgaaggcgacatggcgctggtgtat
ggcattgggttcccgccattccacggtggcgttttccgttaccttgacaccatcggcagt
gcaaattatgtcgaaatggctcagcgttatgcgcatcttggcccgctgtatcacgtccct
gtagggctgagagctaaagctgaacataacgaaagctattatcctgtagcaacagcgctg
cctgatatatctaccagtcaaccggcatga
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