Yersinia kristensenii: HRD70_06015
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Entry
HRD70_06015 CDS
T08672
Symbol
sctE
Name
(GenBank) type III secretion system translocon subunit SctE
KO
K15345
secreted effector protein SseC
Organism
yki
Yersinia kristensenii
Brite
KEGG Orthology (KO) [BR:
yki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yki02000
]
HRD70_06015 (sctE)
Transporters [BR:
yki02000
]
Other transporters
Pores ion channels [TC:
1
]
HRD70_06015 (sctE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SseC
AmiA-like
Mito_carr
D5_N
Motif
Other DBs
NCBI-ProteinID:
QKJ14769
LinkDB
All DBs
Position
1380490..1381956
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AA seq
488 aa
AA seq
DB search
MSDAIAVKTTGLNDWTMMRADKSPALSPVKMPDWRGIAGLPSLVDANISSPNVSQQSAQE
ALDRLFTTLSHNRLDEVGHGRLLLDQLGSIDIQLIMSMAGNLSLGVFSDLCKSIGKQMER
ATDVQTFLRDKRISEYQQQIDKAVEQADKAKKAGVFNAVFDWIIGAVEVVYGALKVAEGV
LTGDPVAITSGVAYLAAGTAGLVKAAAETAMLLGASKEKCQEVIDVAGKVQLGFECFAMA
IDLFQAGRAINAARAVTQGAGDVLKKGGGEALTDAIKRGATEEVEQLAGQFGKDVSQQVS
RNISMKAMDIEMVEASEMASAAAKQAVKAEMTLVRNITKSFTHEGIEKLVSGVTKKLAQD
AIKKGVTLTTEELSRQCTKAIMKKSIKTILKDIATSPLLIIQKCSSAAVQINNGQLSVQS
AGLQKEIQKLILDQDFTQFMDEWVERNKQHQLKQLKETSQDAQESLTNLNDNIRKNGMLQ
VSIANSLI
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgctatagcagttaaaacaactgggctgaatgattggaccatgatgagggcg
gataaaagtcccgctttatcgccggtaaaaatgccggactggcggggtatcgctgggtta
ccttccttggtggatgccaatataagctcacccaatgtgtcgcaacaaagcgcgcaagaa
gcactcgatcgattatttaccactttatctcacaataggttagatgaagtaggccatggc
cgacttttacttgatcaactgggcagcatagacatacagctcattatgtctatggcgggt
aacttgagcctcggggttttttctgatttgtgcaagtcgattggtaagcaaatggagcga
gccacagatgttcagacttttttgcgcgataaacgtatctctgaatatcaacagcagatt
gataaagcggttgaacaagcagataaagccaaaaaagcgggggttttcaatgcggtattt
gattggattatcggagctgtcgaggtggtttatggcgcacttaaggtggctgagggggta
ttaaccggcgatccggtcgccattacctcgggtgttgcttatttagcggcgggcacggcg
ggtttggtcaaagctgctgcggaaacggcgatgttattgggggcatcaaaggagaaatgc
caagaagttattgatgttgcaggtaaagtccaacttggttttgaatgttttgctatggca
attgatctgtttcaagcggggcgtgcaatcaatgctgctcgggcggtgactcaaggtgcg
ggtgatgtgctgaaaaagggcggtggcgaagcattgacggatgctatcaagcggggagca
actgaagaagttgagcagttagctgggcagtttggtaaggatgtaagtcagcaggtcagc
cgcaatatctcaatgaaagcgatggatatagaaatggttgaggccagtgagatggcgtca
gcggccgctaagcaggcggtaaaggctgaaatgactctggtgcgaaatatcaccaagtca
tttacccacgaaggaattgaaaagctggtgagtggggtgacgaaaaaactggctcaggat
gcaataaaaaaaggggtcactctcacaacagaagaattgagtcgacaatgtaccaaagct
attatgaaaaaatcaattaagacaattttaaaggatatagccacctcgcctttactgatt
attcaaaaatgcagtagtgcggcagtacaaattaataatggtcagttatctgttcagagc
gccggattgcaaaaagagatccaaaaattaattcttgatcaagatttcactcaatttatg
gacgagtgggtggagcgaaataaacaacatcaacttaaacaacttaaagaaacatcccag
gatgcgcaagagtcattgacaaatctcaatgacaatattcgtaaaaatggcatgttgcag
gtgagtattgcgaattcattaatatag
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