Yersinia kristensenii: HRD70_08110
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Entry
HRD70_08110 CDS
T08672
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
yki
Yersinia kristensenii
Brite
KEGG Orthology (KO) [BR:
yki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yki03021
]
HRD70_08110 (rapA)
Transcription machinery [BR:
yki03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HRD70_08110 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Cas3-like_C_2
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QKJ15147
LinkDB
All DBs
Position
complement(1828486..1831392)
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AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAIDVRMITLLFPATGENRLYARNDSPITRVMFNPGDT
ITHHEGWQLKVEEVSEENGLITYIGTRLDTEETGVSMREVLLDSKLTFSKPQDRLFAGQI
DRMDRFALRFRARKYQSEQFRLPWSGLRGIRASLIPHQLHIAYEVGQRHAPRVLLADEVG
LGKTIEAGMIIHQQLLSGRAERILIVVPESLQHQWLVEMLRRFNLRFSLFDDSRYSESLL
DSSNPFETEQMVICSLDFVRRNKQRLEQLADASWDLLVVDEAHHLAWSEEAPSREYQVIE
QLAEHIPGVLLLTATPEQLGQQSHFARLRLLDPDRFHDYEEFVNEQQKYRPIADAVTLLL
GGERLTDDKLNLLGELINEQDIEPLLKAANSQTEDSEAARQELVTMLMDRHGTSRILFRN
TRNGVKGFPHRVLHQIKLPLPTQYQTAIKVSGIMSAKKTLEARAKDMLYPEQIYQEFEGE
NATWWNFDPRVEWLLNYLTANRSEKVLVICAQAATALQLEQVLREREAIRAAVFHEGLSL
IERDRAAAYFASEEDGAQVLLCSEIGSEGRNFQFACQLVMFDLPFNPDLLEQRIGRLDRI
GQNREIQIMVPYLENTAQAVLVRWYHEGLDAFEHTCPTGRTIYDSGYQELITYLATPNEQ
AGLDEFIHTCRQQHEGLKLQLEQGRDRLLEMHSNGGEHGQELAQIIADQDNDVNLVSFAL
NLFDIVGINQEDRSDNLIVLTPSDHMLVPDFPGLPQDGCTVTFDREQALSREDAQFVSWE
HPIIRNGLDLILSGDTGSCAVSLLKNKALPVGTLLAELVYVVEAQAPKHLQLTRFLPPTP
VRMLMDRNGTNLAAQVEFESFNRQLNAVNRHTSSKLVNAVQQEVHAMLQQAEALVEEQAR
LLIEAAKHEADDKLSTELSRLEALKAVNPNIRDDEIETLEHNRKMVLENLNQAGWRLDAI
RLVVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgacacagaaagcgaacttggattgggt
accgtcgttgccattgacgtacgcatgatcaccttactgtttcccgccaccggtgaaaac
cgcctttacgccagaaatgactcgccaattacccgcgtcatgttcaatccgggtgatacc
atcactcaccacgaaggctggcagctgaaagtggaagaggtgtctgaggaaaatgggctg
attacctatatcggcacccgcctggataccgaagaaaccggcgtttctatgcgtgaagtg
ttgctcgatagcaaactgacttttagcaaaccgcaggacagattatttgcaggccaaatt
gatcgaatggatcgattcgcactgcgtttccgcgcccgtaaatatcaaagtgagcaattc
cgcttaccatggagtggtctgcgcggtattcgtgccagcctgatcccgcaccaattacat
attgcttatgaagtgggtcagcgccatgcaccgcgtgtcttgctggccgatgaagtcggc
ttgggtaaaaccatcgaagccgggatgattatccaccaacaattgctgtcaggccgtgct
gaacgcatcctgattgtggtgccggaaagcttgcaacatcagtggttggtcgaaatgctg
cgccgcttcaatctgcgcttctcgctgtttgatgacagccgctactccgaatccctgctc
gacagcagcaatccatttgaaaccgaacaaatggtcatttgctcactggattttgtgcgc
cgtaataaacagcgcctggaacagttggcagatgcctcctgggatctgctggtggtggat
gaagcgcaccatctggcctggagtgaagaggccccaagccgcgaatatcaagtgattgaa
cagctcgccgagcatatccccggcgtgttgctgttgaccgccacccctgaacaactgggc
cagcagagccactttgctcgcttgcgcctgcttgatcccgatcgcttccacgattacgaa
gaattcgttaatgagcaacaaaaataccgcccaatcgccgatgcagtcaccttgctgctg
ggcggcgagcgcttaactgacgacaagctaaacctgctcggcgagctgattaatgagcag
gatattgagccgctgctgaaagcagcaaacagtcaaactgaagacagcgaagccgcacgc
caagaactggtgactatgctgatggacagacatggcaccagccgtatcttgttccgcaac
acccgtaatggggtgaaaggcttcccacaccgtgtgttgcatcagattaagctaccgctg
ccgactcaataccaaacagccattaaagtctctggcattatgagtgcgaagaaaactctg
gaagcacgcgccaaagacatgctttatccagagcaaatctaccaagaatttgagggcgaa
aatgccacttggtggaactttgaccctcgggttgaatggctgcttaactacctgacggcc
aatcgcagtgagaaagtgctggttatctgcgcccaagccgccaccgccttgcagcttgaa
caagtgttgcgcgagcgcgaagctatccgcgcggcagtattccatgaaggtttatcactg
attgaacgcgaccgtgcggcggcctatttcgcttctgaagaagatggcgcgcaggtgttg
ctgtgttctgaaataggctctgaagggcgcaacttccagtttgcttgccaattggtgatg
ttcgatttgccttttaacccagatttgctcgaacaacgtattggccgtctggataggatc
ggtcaaaaccgtgaaattcaaattatggtgccttatctggaaaataccgcgcaagccgtg
ctggtgcgttggtatcacgaagggttggatgctttcgagcacacctgcccgaccggccgc
accatttatgatagcggctatcaggaattgattacctatctggcgacgccgaatgaacag
gcagggttggatgaatttatccacacctgccgccagcagcacgaagggctgaaactccaa
ttggagcagggccgtgaccgcctgctagaaatgcattccaatggcggggaacatgggcaa
gaactggcacaaatcattgctgaccaagataatgacgtcaatttggtcagtttcgccctg
aatctgttcgatattgtggggatcaatcaagaagatcgcagtgacaatctgattgtgctg
accccctctgatcacatgctggtgccggacttcccagggctgccgcaagatggctgcact
gtgacttttgatcgcgaacaagcgctatcgcgcgaagatgctcagtttgtcagttgggag
cacccgatcatccgtaatggtttggatctgatcttatccggcgataccggcagttgtgca
gtttctttgttgaaaaacaaagcattgccggtcggtactctgctcgcggagttagtctat
gtggtcgaagcgcaagcaccaaaacacttgcaactgacacgcttcttacccccgacaccg
gtgcggatgctgatggatagaaatggcaccaatttggccgcgcaggttgaatttgaaagc
tttaatcgtcaactgaatgccgtcaatcgccatacctccagcaagttggtcaacgcggtt
cagcaagaagttcacgcgatgttacagcaagcagaagccttggttgaagaacaggcacgt
ttactgattgaagcggctaaacatgaagcggatgacaaactgagcactgagctgtcacgt
ctggaagccctaaaagcggttaaccctaatattcgtgatgacgaaatagagactctggaa
cataaccgtaagatggtgctggaaaacttgaaccaggcgggctggcgtttagatgccatt
cgtttggtggtggtgacgcaccagtaa
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