Yersinia kristensenii: HRD70_08515
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Entry
HRD70_08515 CDS
T08672
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
yki
Yersinia kristensenii
Pathway
yki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HRD70_08515 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yki03019
]
HRD70_08515 (pcnB)
Enzymes [BR:
yki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HRD70_08515 (pcnB)
Messenger RNA biogenesis [BR:
yki03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HRD70_08515 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QKJ17773
LinkDB
All DBs
Position
complement(1927947..1929518)
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AA seq
523 aa
AA seq
DB search
MFTRVANFCRKVLIRDDKSARDSKAVRDDTARDSSARKDIVPGEDNVARKEKRPARTNTG
RKNHAVPASQQPSLQQMASQQSAMTIIPRDQHNISRRDISDNALKVLYRLNKSGFEAYLV
GGGVRDLLLGKKPKDFDITTSATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRG
HHEQQQAEDSDKNSSQQAQNGMLLRDNIFGTIEDDAQRRDFTINSLYYGISDFALRDYTG
GLRDLKEGIIRLIGSPETRYREDPVRMLRAVRFAAKLDMTISPETAEPIPRLASLLHEIP
PARLFEESLKLLQSGYGYKTYLKLCEYQLFQPLFPLIARHFTEHHDSPMERILVQVLKNT
DYRLHNDKRVNPAFLFAAMLWYPLIEHAQKLTQESGLAYYDAFALAMNDVLDEECRSLAI
PKRITSLVRDIWLLQLRLSRRQGKRAHKLMEHPKFRAAYDLLALRAEVENNHELQRLAQW
WGEFQEATPLQQKNMLNTLGADPAPRRSRPRRPRKPAPRNEGA
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atttttacccgagtagccaatttctgccgtaaggtactgattcgcgatgataaatcagct
cgcgatagcaaagctgtccgtgatgacacggcccgtgatagcagtgcccgtaaagatata
gtgcccggtgaagataacgtggcccgcaaagagaaaaggcctgccagaacgaatactggc
cgcaagaatcatgcggtgcctgcgtcacaacagccttctttacaacaaatggcttcacaa
caaagtgcaatgacgatcattccacgcgatcagcacaatatttcccgtagagatatcagt
gataatgcgctgaaggttctctatcgcctgaataaatcaggttttgaagcttatctggtt
ggcggcggtgtccgtgacctgctgctgggcaaaaaaccgaaagattttgatatcaccacc
agcgccacgccagaacaagtgcgaaaattattccgcaactgccgcttggtcggtcgccgt
ttccgtctggcccatgtgatgttcggcccagaaatcattgaagtcgccactttccgtggt
caccacgagcagcaacaagcggaagacagtgacaaaaattcttctcagcaagcacaaaat
ggcatgctgctgcgtgacaatattttcggcactattgaagatgatgctcagcgccgcgac
ttcactattaatagcctctattacggtatttctgattttgcgctgcgcgattacaccggc
ggtttgcgtgatctgaaagaaggtatcatccgcctgattggttcccctgaaacccgctat
cgtgaagatccggtgcggatgctgcgagcagttcgttttgccgccaaactggatatgacc
atcagcccggaaactgcagagccgatcccgcgtctggcttcactgctgcacgagatcccg
cccgcgcgcctgtttgaagagtcactcaagctactgcaatccggctacggctataaaacc
tatttaaaactgtgtgaatatcagcttttccagccgttattcccgctgattgcccgccat
tttaccgaacatcatgactcaccgatggaacgtattctggttcaggttctgaaaaataca
gactatcgtttgcataatgataagcgcgtcaatccggcattcttatttgccgctatgctt
tggtatccgctgattgaacatgcgcagaagctgacgcaagaaagtggtctggcctattat
gatgctttcgcactggcaatgaatgatgtgctggatgaagaatgccgttcactggcgatt
ccaaagcgtataacctcattggtgcgagatatctggttgctgcaactgcgcctgtcgcgc
cgtcagggtaaacgtgcgcataagctgatggagcatccaaagttccgggcagcttatgac
ttgttagcattgcgcgcggaagtagaaaataaccatgagttacagcgtcttgcgcagtgg
tggggcgaattccaagaagccacgccgctacaacaaaaaaatatgctgaataccttaggg
gccgatccagcgccgcgtcgctcgcgtcctcgccgcccacggaagccagcaccacgtaac
gaaggggcataa
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