KEGG   Yersinia kristensenii: HRD70_09880
Entry
HRD70_09880       CDS       T08672                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
yki  Yersinia kristensenii
Pathway
yki03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:yki00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    HRD70_09880 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:yki03019]
    HRD70_09880 (rnc)
   03009 Ribosome biogenesis [BR:yki03009]
    HRD70_09880 (rnc)
   03036 Chromosome and associated proteins [BR:yki03036]
    HRD70_09880 (rnc)
Enzymes [BR:yki01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     HRD70_09880 (rnc)
Messenger RNA biogenesis [BR:yki03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HRD70_09880 (rnc)
Ribosome biogenesis [BR:yki03009]
 Eukaryotic type
  90S particles
   RNase
    HRD70_09880 (rnc)
 Prokaryotic type
  rRNA processing factors
   HRD70_09880 (rnc)
Chromosome and associated proteins [BR:yki03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     HRD70_09880 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DSRM_2 RM44_endonuclase DND1_DSRM
Other DBs
NCBI-ProteinID: QKJ15459
LinkDB
Position
2220011..2220691
AA seq 226 aa
MNPIVINRLQRKLGYTFQQQELLLQALTHRSASSKHNERLEFLGDSILSFVIANELYHRF
PRVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKSGGFRRESILADTVEALI
GGIFLDSDIHTIGRLILDWYRSRLDEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGLNEPVIGTGSSRRKAEQAAAEAALIKLELE
NT seq 681 nt   +upstreamnt  +downstreamnt
atgaaccccatcgtaataaataggctacagcggaagctgggctacacttttcaacagcag
gagctcttgctgcaagcactgactcatcgtagcgccagtagcaaacataatgagcgtttg
gagttcctgggtgactctatattaagtttcgttattgccaatgagctgtatcaccgtttt
ccccgtgttgatgaaggggatatgagtcggatgcgagcgacattggtcagaggcaatacg
ctagccgaaatggcccgtgagtttgaccttggtgaatgtttacgccttggcccgggtgag
ttgaaaagtggcggtttccgccgtgaatcaattttggcagatacggtcgaagctttaatc
ggcggtatattcttagacagcgatattcatacgattggacggctgattctcgactggtat
cgcagtcggttagacgaaatcagccctggtgataagcagaaagatccaaaaacgcgcttg
caagaatatttgcagggccgtcatctgccattaccctcttatctggttgtgcaggttcgc
ggtgaagcacatgaccaggaatttactatccactgccaggtgagtggcttgaatgaaccg
gtaataggcaccggctcaagtcgccgtaaagctgagcaggcggcagcggaagcagcgctg
ataaagttggagcttgaatga

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