Yersinia kristensenii: HRD70_12210
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Entry
HRD70_12210 CDS
T08672
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
yki
Yersinia kristensenii
Pathway
yki03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HRD70_12210 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yki03400
]
HRD70_12210 (nfo)
Enzymes [BR:
yki01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
HRD70_12210 (nfo)
DNA repair and recombination proteins [BR:
yki03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HRD70_12210 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QKJ15873
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All DBs
Position
complement(2736420..2737265)
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AA seq
281 aa
AA seq
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MKFVGAHVSAAGGVDQAVIRAHELEATAFALFTKNQRQWRAAPLAEDVIEKFKQACEQYG
YTSAQILPHDSYLINLGHPVTEALEKSREAFIDEMARCQQLGLSLLNFHPGSHLLQIDED
KCLARIAESINIALDASEGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT
CHAFAAGYDLRTEADCEHTFNQLGEIVGFQYLRGMHLNDAKSEFNSRVDRHHSLGEGNIG
KTVFSYIMRDPRFDNIPLILETVNPDIWAEEIAWLKSQAEI
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtcggtgcacatgtcagcgcagcaggtggtgtagaccaggctgtgattcgg
gcgcacgaacttgaggccactgcctttgccctgtttaccaagaatcaacggcaatggcgc
gccgcgccgttagcggaagatgttattgaaaaatttaagcaggcttgtgagcaatatggt
tacacctcagctcaaatcctgccgcacgacagttatttgattaacctcggtcatccagtc
accgaggcactggaaaaatcccgtgaagcctttatagatgaaatggcccgctgccagcaa
ttgggcttgtcattattgaacttccatcccggcagccatttactgcaaattgatgaagat
aagtgtctggcgcgtattgcagaatcgatcaatatcgcgctggacgccagtgaaggcgtg
accgcagtgattgagaatactgctggtcagggcagcaacctcggcttcaagtttgaacat
ctggctgccatcattgatggggtggaagataagagccgcgtgggagtttgcattgatacc
tgccatgctttcgctgccggttatgatttacgcaccgaagcagattgtgaacatactttc
aatcagcttggtgaaatcgtcggcttccagtatttgcgcggtatgcatcttaatgatgct
aaaagtgaatttaacagccgtgtcgaccgccaccacagcttaggtgagggcaatatcggc
aaaacggtgtttagctatattatgcgcgatccgcgctttgataatattccgctgattctg
gaaacagtgaacccggatatctgggccgaagagatagcctggttgaaatcacaggcggaa
atttaa
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