Yersinia kristensenii: HRD70_12555
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Entry
HRD70_12555 CDS
T08672
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
yki
Yersinia kristensenii
Brite
KEGG Orthology (KO) [BR:
yki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yki03009
]
HRD70_12555
Ribosome biogenesis [BR:
yki03009
]
Prokaryotic type
ribosomal protein modification factors
HRD70_12555
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Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
QKJ15936
LinkDB
All DBs
Position
complement(2822163..2823929)
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AA seq
588 aa
AA seq
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MTQTFIPGKDAALEDSISRFQQKLSDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNG
KGASKKAALASALGEYFERLSTNYFFADFYLGKGIAEGDFVHYPNEKWFPIPEDDLLPEG
ILDERLLAFYDPENELVSSDLVDLQSGNAARGICSLPFIRQSDLETVYIPMNIIGNLYVS
NGMSAGNTANEARVQALSEVFERSVKNRIIAESISLPEIPAEVLNRYPGVVEAIAKLEEE
GFPILSYDASLGGAYPVICVVLFNPSNGTCFASFGAHPDFGVALERTVTELLQGRSLKDL
DVFTAPTFDDEEVAEHTNLETHFIDSSGLISWDMFKQQADYPFVDWSFKGTTEEEFATLM
AIFKQEDAEVYIADYEHLSVYACRILVPGWSDIYPAEDLLMANNTMGVHLRSTLLALPDT
DWQPAQYLELIQTLDDEGLDDFARVRELLGIASGKDNGWYTLRVGELKSMLALAGGDLEQ
ALIWVEWTQDFNSSVFTAKQANYYRCLQTLLLLTQEPERDAAQYYGAFVKMYGQEAVEAA
SAAIAGEERFNGLFSVDEDLKALPAHQALLGAYAKLQAAKRRYWAKSE
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaacttttattcccggcaaagacgccgcgctggaagactccatctcccgcttt
cagcaaaaactgagcgacctcggttttaatattgaagaagcctcttggctgaatccggtt
cctcacgtttggtcggtacatatccgcgatcgtgactgtccgctgtgctttactaatggc
aaaggcgctagcaagaaagccgcattggcttcggccttgggtgaatatttcgaacgttta
tccactaactatttctttgcggacttctatctgggcaaaggtattgcggaaggtgacttt
gttcattatccgaatgaaaaatggttccccatccctgaagatgacttgttgccggaaggt
attctggatgagcgcctgttggcgttttacgatccagaaaatgagctggtgagtagtgac
ctggtggatttgcagtcaggtaatgcggcgcgcggtatctgctctctgccattcatccgc
cagtcagatttagaaaccgtctatattccaatgaatattatcggcaatctgtatgtttca
aacggcatgtctgcgggcaataccgccaatgaagcccgggtgcaagcattgtctgaagtg
tttgaacgttcagtgaaaaatcgtattatcgccgaatctatcagcttgccagaaatcccg
gccgaggtgttaaaccgctatccgggcgtggtagaagctatcgccaaactggaagaggaa
ggtttcccgatcctgtcttacgatgcctctttaggcggcgcttatccggtcatttgtgtg
gtgctgtttaacccatccaacgggacttgctttgcttcatttggtgcgcacccggatttc
ggtgtggcccttgagcgtacagtgactgagttattacaaggtcgtagcctcaaagacttg
gatgtgtttaccgcgccaacctttgatgatgaagaagtcgctgagcataccaatctggaa
acacactttatcgattcaagcggcttaatcagttgggatatgtttaaacaacaagctgat
tatcctttcgtggattggagctttaaaggcaccactgaagaagagttcgccaccttgatg
gctatcttcaagcaagaagatgctgaagtgtatatcgctgattatgaacatttaagtgtc
tatgcctgccgcattctggtgccaggctggtcagatatctaccctgccgaagatttgttg
atggcaaacaacaccatgggtgtacatctgcgtagcactttactggccttgccggacact
gattggcaaccagcacaatatctggaactcattcagactttggatgatgagggtttggat
gatttcgcccgagtccgtgagttgttgggtattgcctccggtaaagataacggctggtac
acgctgcgggtgggtgagttgaaatctatgctggccttggccggcggtgatttagagcaa
gcgctgatttgggtcgagtggacacaagatttcaactcttctgtcttcaccgctaaacag
gcgaattattaccgttgcctgcaaactctgctgttgctgacccaagaaccagagcgtgat
gcggctcagtattatggcgcttttgtgaagatgtatggtcaggaagctgtagaggctgca
tccgcggcgatcgccggtgaagagcgctttaatggcctgttcagtgtcgatgaagatctc
aaagccctgccagcacaccaagcgctgctgggtgcttacgctaaattgcaggcggcgaaa
cgccgttattgggcaaaaagcgagtaa
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