Yersinia kristensenii: HRD70_13875
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Entry
HRD70_13875 CDS
T08672
Symbol
exoX
Name
(GenBank) exodeoxyribonuclease X
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
yki
Yersinia kristensenii
Pathway
yki03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HRD70_13875 (exoX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yki03400
]
HRD70_13875 (exoX)
DNA repair and recombination proteins [BR:
yki03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HRD70_13875 (exoX)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
TFIIF_beta
Motif
Other DBs
NCBI-ProteinID:
QKJ16174
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All DBs
Position
complement(3108580..3109239)
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AA seq
219 aa
AA seq
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MCFRVIDTETCGFEGGIVEIASVDVVNGVVINPMSDLVSPDRPISLDAMVIHHITEEMVE
GKPRIAVAVRKYQGSPYYVAHNAPFDRGVLPEMGGQWICTLKLARMLYPEIKHSNQYLRY
ALRLNVSVPENLYPHRALYDCYVTAALLQRIMRDSGWSAEQMVEVTQQPLLLQTFKFGKY
RGKSIEQIARQDPDYLRWMLTSIADLTPDMRHTLTHYLA
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgtgttttcgtgtcatcgatactgaaacttgcggctttgagggcggtattgttgaaatc
gcatctgttgatgtcgttaatggggtcgtaatcaaccctatgagtgacctggttagccca
gatagaccaatcagtctcgatgccatggtaattcaccatatcacggaagaaatggtggaa
ggtaaaccccgaattgccgttgcggttagaaaatatcaagggagcccttattacgtcgct
cataatgccccgtttgaccgcggtgtgttgccggagatgggtggtcaatggatttgcacg
ttaaagcttgctcgtatgctctaccctgagattaaacacagtaatcaatatctgcgttac
gctttgcgcctgaatgtttcagtgccagagaatctttatccacatcgagctttgtatgat
tgttatgtcaccgccgcgctgttgcagcgcatcatgcgagactcaggatggagtgctgag
caaatggtggaagtaacgcaacaaccgctgttattacaaacatttaagttcgggaaatat
cgtggaaaaagtattgaacagatagcccggcaagatccggactacctgcgctggatgctg
acctcaattgcagaccttacacccgatatgcgccataccttgacacattatctggcgtaa
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