Yersinia kristensenii: HRD70_16095
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Entry
HRD70_16095 CDS
T08672
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
yki
Yersinia kristensenii
Pathway
yki03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HRD70_16095 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yki03400
]
HRD70_16095 (xthA)
Enzymes [BR:
yki01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
HRD70_16095 (xthA)
DNA repair and recombination proteins [BR:
yki03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HRD70_16095 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
QKJ16568
LinkDB
All DBs
Position
3587125..3587931
Genome browser
AA seq
268 aa
AA seq
DB search
MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEEVSQHGYHVFYHGQK
GHYGVALLTKNEPLAVRRGFPTDEEDAQRRIIMADIATPQGPLTVINGYFPQGESRDHPI
KFPAKERFYADLQQYLEQQLSSDAQVLIMGDVNISPTDLDIGIGEESRKRWLRTGKCSFL
PEERAWLERLQNWGLVDTFRAANPNCNDQFSWFDYRSRGFDENRGLRIDLLLASHPLAAR
CIATGIDYDIRSMEKPSDHAPVWSEFAL
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgtctcttttaatatcaatggcctacgtgctcgacctcatcaacttgctgca
ataatcgaacaacatcaacccgatgttattggacttcaagaaacaaaagtacatgatgat
atgtttccgcttgaagaagtcagtcagcatggctatcacgtcttttatcatggacaaaaa
ggccattacggcgttgcattgttaaccaagaatgaacccttagccgtgcgacgtggattt
cctaccgatgaagaagatgcacagcgccgtattattatggctgatattgcgacaccacaa
ggcccattaaccgtgattaatggctatttcccccaaggggaaagccgtgaccatcccata
aaatttcctgctaaagagcgtttttatgctgacttacagcagtacttggaacagcaactg
tcatctgatgcccaagtattaattatgggagatgtcaatatcagcccaacagatctggat
attggtattggcgaagagagccgcaagcgctggttgcgtacgggtaaatgttcattccta
cctgaagaacgtgcatggctggagcgtttacaaaattggggattagtggatacattccgt
gcagcaaatcccaattgtaacgaccaattttcatggtttgattaccgttcacgtggtttt
gacgagaatagaggcttacgcatagatttattgctggcgagccaccctctggcagctcgc
tgcattgccactggcattgattatgatattagaagtatggaaaaaccctcagaccacgcc
cctgtgtggtctgaattcgcactctaa
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