Yersinia kristensenii: HRD70_16665
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Entry
HRD70_16665 CDS
T08672
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
yki
Yersinia kristensenii
Brite
KEGG Orthology (KO) [BR:
yki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yki03016
]
HRD70_16665 (rnd)
Enzymes [BR:
yki01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HRD70_16665 (rnd)
Transfer RNA biogenesis [BR:
yki03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HRD70_16665 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
QKJ16675
LinkDB
All DBs
Position
complement(3682306..3683427)
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AA seq
373 aa
AA seq
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MNYQLITTDSALQQVCEQARTHAHVALDTEFVRTRTYYPQLGLIQLYDGEQLSLIDPLPI
TQWQPFRELLQDLNVVKYLHAGSEDLEVFLNAFDIMPTPMIDTQVLAAFSGRTLSCGFAM
LVNEFEGVELDKSESRTDWIARPLSEKQCDYAAADVFYLLPLATKLVEATEAAGRMDAAK
DECELLCRRRSETLDPELAYREITNAWQLRGHQLACLQKLASWRLRQARERDLAVNFVVR
EENLWQVARYQPTSLGELDSLGLSGQEIRYHGRTLLALVVEGNAVPDDQLPPPVINLIDQ
PGYKKVFKDIKALIVSVSERSGLSSELLASRRQINQLLSWHWKLKLTETQPELLSGWRGE
LLSPELTEILQQY
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcagttgatcacgaccgacagtgcgttgcagcaggtctgcgaacaagcccga
acacatgcccatgttgcgctggatacagagtttgtcagaacccgcacttactatcctcag
ttgggcttgattcaactgtatgacggtgaacaactttcactgattgatcccttgcccatt
acgcagtggcaacctttccgtgagttgctacaagatttgaatgtggtgaagtatctgcat
gcgggtagcgaagatctcgaagtcttcttaaatgcctttgatatcatgccgacgccgatg
attgatactcaggtattggccgcattttctggccgcacgttatcttgcggctttgccatg
ttggtgaatgagtttgaaggtgtcgaattagataaaagtgaatctcggacggattggatt
gctcggcccctgagtgaaaaacagtgtgattacgccgctgcggatgtattttatttgttg
ccgttggccactaagttggttgaggcaaccgaagctgccgggcgaatggacgccgctaaa
gacgagtgtgagctgttgtgccgccgccgcagtgaaacactcgaccccgaattagcctat
cgtgaaatcaccaatgcctggcagttgcgcggccatcagttggcttgcctacaaaagctg
gcatcatggcgcttgcgtcaagctcgtgagcgcgatctggccgtgaactttgtggttcgt
gaagagaatctgtggcaagtcgcccgttatcagccaacctcattgggcgagctggattca
ctaggcttaagtggacaggagattcgctatcatggccgcaccttgctggcgctggtggtt
gaaggtaatgccgtccctgatgatcaactgccgccaccggttattaatctaattgaccag
ccgggttacaaaaaagtctttaaagatattaaagcacttattgtgtctgttagtgagcgc
agcgggctaagcagtgaattactggcatctcgccgccaaataaaccaattactcagttgg
cattggaaattgaaattaacagagactcagcctgaattattaagtggttggcgtggtgaa
ttattgtcgccggaattgactgagattttacagcaatattaa
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