Yersinia kristensenii: HRD70_19440
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Entry
HRD70_19440 CDS
T08672
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
yki
Yersinia kristensenii
Pathway
yki03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
yki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HRD70_19440 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yki03400
]
HRD70_19440 (uvrB)
DNA repair and recombination proteins [BR:
yki03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HRD70_19440 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HRD70_19440 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
UB2H
AAA_30
DUF87
SBDS_domain_II
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QKJ17168
LinkDB
All DBs
Position
complement(4275569..4277581)
Genome browser
AA seq
670 aa
AA seq
DB search
MSKLFKLHSEFKPAGDQPEAIRKLEEGLENGLAHQTLLGVTGSGKTFTVANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRAILRRLSELQ
YSRNDQVFQRGTFRVRGEVIDIFPAESDEWAVRVELFDEEVERLSIFDPLTGQLQHEVPR
FTVYPKTHYVTPRERILQAMEDIKVELAERRQVLLANNKLLEEQRITQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEAPPTLFDYLPADGLLIVDESHVTIPQIGGMYKGDRSRKET
LVEYGFRLPSALDNRPMRFEEFEALAPQTIYVSATPGKYELEKSGGDIIEQVVRPTGLLD
PLIEVRPVATQVDDLLSEIRIRAAINERVLVTTLTKRMAEDLTEYLVEHGARVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYGDRITASMEKAIGETQRRRAKQQTYNEERGIIPQGLNKKVGDILQLG
QPSLRGKGKGRGGKVVDTHDYQSLAPKALDQKIRELEAKMYTHAQNLEFEQAAELRDQVH
QLRQQFIAIS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaattattcaaactacattctgagtttaagccagcaggtgaccagcctgaggcc
atccgtaaactggaggaggggctggaaaatggtctggcccaccaaacgctgttaggggtg
acgggctcgggtaaaacctttacggttgccaatgttattgctgatttgaatcgacccacg
atggtgttagcgcccaacaaaaccttagcggcacagctttatggcgagatgaaagagttt
ttccccgataacgcagtagaatatttcgtctcttactatgactattatcaacctgaagcc
tatgtcccaagctctgatacctttattgagaaagatgcctcggtaaacgagcatatcgag
caaatgcggctatcggcgactaaggccctgctggagcggcgtgatgtcgtggtggtggcc
tcggtctctgccatttatggtttgggtgaccctgatttatatctgaaaatgatgctgcat
ttaaccaagggcatgataattgatcagcgcgcaattttacggcgtttgtcagagttgcaa
tacagtcgcaatgatcaggtatttcagcgcggcactttccgggtacgtggcgaggttatc
gacatcttcccggcggaatctgatgaatgggctgtgcgggttgagttatttgatgaggaa
gtcgagcgcttatccatctttgatccactcactggccagttacagcacgaagttccccgt
tttactgtttatcctaaaacgcactatgtgaccccgagggagcgaattttacaggcaatg
gaagacatcaaagttgagctggctgagcggcgtcaggtgctattagccaacaacaaattg
cttgaagaacaacgtattacgcagcgaactcagtttgacttggaaatgatgaatgagctg
ggctattgctccggtattgaaaactattctcgctatctttctggccgtgggcccggtgaa
gcgccgccaacactctttgattacttaccggcggatggtttgctgattgttgatgaatct
cacgtcactatcccgcaaatcggtgggatgtacaaaggtgaccgttcgcgtaaagaaaca
ttggtggaatatggcttccgactgccatcggcgctggataaccgccctatgcgttttgaa
gaattcgaagctctggcgccccagaccatttatgtttcggctacaccaggcaaatatgaa
ctggagaaatccggtggcgatattattgagcaagtggtgcgcccaactggcttgctcgat
ccattgattgaagtgcgccctgtggcaacacaggtggatgatttgctgtcagagatccgc
atccgcgccgcgattaatgagcgggtactggtgaccacgctgactaagcggatggctgaa
gatttaactgagtatctggtagaacatggtgcgcgggtacgttacttgcattcggatatt
gataccgttgagcgcgtagagattatccgcgatttgcggctgggcgagtttgatgtgctg
gtggggatcaacttactgcgagaagggctggatatgccggaggtttctctcgtcgccatc
cttgatgcggataaagaaggtttcctgcgctctgagcgctccttaatccagaccattggc
cgtgcagcacgtaacctcaatggtaaagctattctttatggcgacagaattacagcctcg
atggaaaaagccattggcgaaacgcagcggcgtcgggctaagcagcaaacttacaatgaa
gagcgcggtattattccacaggggctcaacaagaaagtcggcgatattctgcaattgggc
caaccttcactgcgtggcaaagggaaagggcggggcggtaaagtggttgatacccatgat
taccaatctctggcaccgaaagcgcttgatcaaaaaatccgggagttggaagcgaaaatg
tacacacacgcgcaaaatctggagttcgaacaggcggcagaattacgcgatcaggtacat
caattgcgccagcagtttatcgccatatcttaa
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