Yersinia kristensenii: HRD70_20015
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Entry
HRD70_20015 CDS
T08672
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
yki
Yersinia kristensenii
Pathway
yki03030
DNA replication
yki03430
Mismatch repair
yki03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HRD70_20015 (holA)
03430 Mismatch repair
HRD70_20015 (holA)
03440 Homologous recombination
HRD70_20015 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yki03032
]
HRD70_20015 (holA)
03400 DNA repair and recombination proteins [BR:
yki03400
]
HRD70_20015 (holA)
Enzymes [BR:
yki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HRD70_20015 (holA)
DNA replication proteins [BR:
yki03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HRD70_20015 (holA)
DNA repair and recombination proteins [BR:
yki03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HRD70_20015 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
CcdB
Motif
Other DBs
NCBI-ProteinID:
QKJ17261
LinkDB
All DBs
Position
4403418..4404452
Genome browser
AA seq
344 aa
AA seq
DB search
MIRVYPEQLVAQLHEGLRACYLLCGNEPLLLQESQDHIRRVATSHDFTEHFSFTLDAHTE
WDNIFSLCQALSLFASRQTLLLSFPDSGLTAPMNEQLVKLSSLLHPDILLILRANKLTKA
QENSAWFKALSPNGVFVSCQTPEQAQLPRWVSARAKNLNLEVDDAAVQLLCYCYEGNLLA
LSQALERLSLLYPDGKLTLPKVEHAVNDAAHFTPYHWLDALLAGKSKRAWHILQQLQQED
SEPVILLRTLQRELLLLLTLKRRMEQVPLRTLFDQFKVWQNRRPMMTQALQRLSMQQLQH
AVHLLAQIEVRLKQDYGQSIWPELETLSMLMCGKNLPESFFDAE
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatccgagtttatcctgaacaacttgtcgcgcagctccatgaggggctgcgtgcttgt
tatctgttatgtggtaacgaacccttattgttacaggaaagccaagaccatattcgccgt
gtcgcaacttcacatgatttcaccgagcatttcagtttcacgctggatgcccacactgaa
tgggacaatatttttagtctttgccaggcgttgagtttatttgccagccgccagacactg
ctattgagcttcccggacagtgggttgaccgcgccgatgaatgaacagttggtcaaatta
tccagcttgctacacccagatatattgctgatattgcgcgccaataaactcactaaagcg
caagaaaacagcgcctggtttaaagccctcagcccaaatggtgtttttgtcagttgccag
acacctgagcaagcacagcttccccgctgggtaagtgcccgcgccaaaaatctgaatctg
gaggtagacgatgccgccgttcagctactttgctactgctatgaaggtaacctgctggcg
ttatcacaggcattggaacggctctcattgctttatcctgacggcaaactgacactgccc
aaagtagagcacgccgtcaacgacgctgcacatttcaccccttaccactggcttgatgcc
ttactggctgggaaaagcaaacgcgcctggcatattctgcaacagttgcagcaggaagac
agtgagcccgttattttactgcgcacccttcagcgcgagttattgctgttgttaacccta
aaacgccggatggaacaggtaccactgagaaccttatttgaccaattcaaagtgtggcaa
aatcgccgtccgatgatgactcaagcactacagcgcctttccatgcaacaactgcaacac
gctgtgcatttattagcacagatagaagttcgcctgaaacaggactatggccagtcaatc
tggccggagctagaaacactgtctatgctgatgtgtggaaaaaatttacctgagagtttt
tttgatgccgaataa
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