Yersinia kristensenii: HRD70_20035
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Entry
HRD70_20035 CDS
T08672
Symbol
mrdA
Name
(GenBank) peptidoglycan DD-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
yki
Yersinia kristensenii
Pathway
yki00550
Peptidoglycan biosynthesis
yki01100
Metabolic pathways
yki01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
yki00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HRD70_20035 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HRD70_20035 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yki01011
]
HRD70_20035 (mrdA)
Enzymes [BR:
yki01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HRD70_20035 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
yki01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HRD70_20035 (mrdA)
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GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
QKJ17265
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Position
4406369..4408264
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AA seq
631 aa
AA seq
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MKKEPNPFRDYSAESALFVRRALVAFLGILLLSGILVANLYNLQIVRFEDYRTRSNENRI
KLVPIAPSRGMIFDRNGTPLAMNRTIYQLELMPEKIEDLPATLNALRPVVDLTDEDIANF
EKERKRSRRFTSIAVKTPLSEVQVARFAVNQFRFPGIEVKGYQRRFYPYGSALTHVIGYV
SKINDKDVERLDKEGILANYAATHDIGKLGIERYYESVLHGKTGYEEVEVNNRGRVIRQL
HEQPPQAGKDIYLTIDLHLQTYIEQLLSGSRAAVVVSDPRTGGILALVSNPSYDPNLFVD
GISNKDYQGLLNDPNRPLINRATQGVYPPASTVKPYIAVSALSAGVITKNTSLFDPGWWQ
LPGSEKRFRDWKKWGHGRLNVTKALEESADTFFYQVAYDMGIDRLSAWMTKFGYGEYTGI
DLSEERAGLMPTREWKQKRHKKPWYQGDTIPVGIGQGYWTATPIQMAKALTTLINDGAVK
TPHLLQSTRIDGVLVPYKQEDTTQIGDIHSGYWEIAKDGMYGVANRPNGTGRKFFEGTPY
KAAVKSGTAQVYSYETYNVHKVAEHLRDHKLMVAYAPYENPTVSVAMILENGGAGPAVGT
ITRQILDHILLGDNNTELPDAAPLPPGVEAD
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagaacctaacccttttcgcgactattcggctgaatcagccttgtttgtccgg
cgtgccctggtggcctttctcggtatcctgctgctcagcgggatattggtcgctaatctg
tacaatttgcagatagtccgttttgaagactatcgcacccgatccaatgagaaccgcatt
aaattggttcccatcgcgccaagtcgtggcatgatatttgaccgaaacggcactccattg
gcgatgaaccggacaatttatcagttagaactgatgccggaaaaaattgaagacctcccc
gccaccctcaatgcactgcgcccggtagtggatctgacggatgaggatatcgccaacttt
gaaaaagagcgtaagcgctcacgccgcttcacttcaattgcggttaaaacgccgctttct
gaagtacaagtcgctcgtttcgccgttaatcaattccgcttccccggcattgaagtcaaa
ggctatcaacgccgcttctacccttatggttcggcactgacacacgttatcggctatgtt
tccaagattaacgacaaagacgttgaacgcctggataaagagggtattctcgcgaactat
gccgcaacgcacgatatcggcaagcttggtattgaacgctattatgagtcggtattacac
ggaaaaaccggttatgaagaagttgaagtgaataaccgtggccgggtgatccgccaattg
catgagcagccgccacaggccggtaaagatatctatctgacaattgatttgcatctgcaa
acctatattgagcaattgttaagtggcagccgcgcggcggttgtcgttagcgacccgcga
accggtgggattttagccttggtatccaaccccagctatgaccctaacctgtttgttgat
ggtatctccaataaagattatcaagggctattgaatgacccgaatcgcccactgataaac
cgtgccactcaaggggtttacccgccagcgtcgacagtaaaaccctatattgctgtttcg
gctctcagcgccggtgttatcaccaaaaataccagcctctttgaccccggttggtggcag
ttacccggttcagaaaaacgctttcgcgactggaaaaaatggggccatggccgcttgaat
gtcaccaaagcgctggaagagtcggctgataccttcttctatcaggtcgcttatgacatg
gggattgaccgcttatccgcgtggatgaccaaattcggttatggtgaatataccggtatc
gacttatccgaagaacgggctggcctgatgccgactcgtgaatggaaacaaaaacgtcat
aaaaagccgtggtatcaaggggacaccatcccggtgggtatcggtcagggttattggact
gccacccctatccagatggcaaaagcattgacgaccctgattaatgatggtgcggttaaa
acacctcatttgttgcaaagcacgcgtattgatggcgttttagtcccttataaacaagaa
gataccactcaaattggtgatatccattccggttactgggaaattgccaaagatggcatg
tatggtgtagccaaccgcccgaacggaacaggccgtaagttctttgaagggactccgtat
aaggctgcagtaaaatccggtacggcacaggtgtacagttacgaaacttataatgttcat
aaagtggcggagcatttgcgtgatcataagttaatggtcgcgtatgccccctacgaaaac
ccgacggtatctgtcgccatgatcttagaaaatggcggtgccgggcctgcggtggggacg
attactcgtcaaattctcgaccatatcttattgggcgataacaacactgaattaccggac
gcagctcctctgcctccgggcgttgaagcagactag
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