Yersinia kristensenii: HRD70_21465
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Entry
HRD70_21465 CDS
T08672
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
yki
Yersinia kristensenii
Brite
KEGG Orthology (KO) [BR:
yki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yki03400
]
HRD70_21465
DNA repair and recombination proteins [BR:
yki03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HRD70_21465
Archaeal homologous recombinant proteins
HRD70_21465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
Bac_DnaA
ABC_tran
nSTAND3
AAA_21
cobW
NTPase_1
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
QKJ17527
LinkDB
All DBs
Position
4675725..4679414
Genome browser
AA seq
1229 aa
AA seq
DB search
MRILSLRLKNINSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LTVTPSQNELMTRHTAESLAEVEFEVKGTRYRAFWSQRRAKNSPEGNLQAPKVELALCEN
GKILADKVRDKLDMVAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTDI
YGRLSEHVFEQHKLAKTALDVLHQRANGIELLNEEQRLALAEQLNSLEEQEKQLSAAQRV
NQNQINWLASWQQQQKNVLEYQQQQKLIEQEYHQAQPELQQLARSEPAEKLRPLLHERSR
SLQDLQQIQLRITTLAGQQQQLQTQLTPLARALEQANLARQQQAAEQHEQEILIEQKVIP
LDNLIAQQQHSLMLLGTQLQQLQSKEQQSRQQLELNEQQLKQTQQRLQQLTEYTHQYAHH
QHWEKNLPLWREQFRQLQIQQQQAVDSEQQRQQQVTLLTALQQQIDTLNKQDKQQQTALV
QAQSQTGSIQQQLTALEQQHPSAQLRQQLFRLQQQRPVRQQLAALSPLVQQIQALHDKQQ
QQAASQQQQLILLEQQLAEKRQLYKQQKQHLTTLETLLEREKQIVRLEAERAKLQPGEAC
PLCGALDHPAITEYQAVKPSETAIRVEEQRLQVERLSTEGSELNAQTQSLLQQLKHLEQE
LQHSNQQLIDYQQQWQTLTQPLELTFALNEPVALTIWLEQQEQSEQSCQLKLAEYERLNQ
QYQQAKDILTQAEQQQQKHQQQLALILQRQQDTKESQQKSLAQYQHQQAELAKMRQDVSH
ALTELSLSLPEADQQQSWLASREAENQRWHQYQQEQQQLALGQKTLETQIENEHRHLQEC
GEQLSLLTQQHQQTEALLQQQKQQRLALFGDGNVSEVRQLLRQQQQQAELAQQNAAQALQ
QVQSQLNLLSGELAGLEQQQCQYQQRAATAQAELQQALASSEFDDEATLTAALLSEEERQ
RLQQLKQQLSERQQQAHIRQQQASEAMAQLIQSCPVGVSQTSELAALQLLSEQLLAQLKA
NTLQQGELRNQLESDTVRRSNQHALFEQIEHSQQQYDDWSYLNHLIGSKEGDKFRKFAQG
LTLDHLVYLANNQLSRLHGRYQLQRKASDALELLVVDTWQADAIRDTRTLSGGESFLVSL
ALALALSDLVSHKTSIDSLFLDEGFGTLDAETLDIALDALDSLNASGKTIGVISHVEAMK
DRIPVQIKVKKVNGLGISRLDNAFRVNQD
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgagaattttaagcctgcgtctaaaaaacattaattctctacagggcgaatggaagatt
gatttcactgctgagccctttgccagcaatggtttattcgctatcaccggccctacaggg
gcaggtaaaaccaccctgctcgatgctatttgtctcgcgctgtatcaccagactccgcgt
ttgactgtcacacctagccaaaatgaactgatgacccgccatactgcagagtcgctagct
gaagttgaatttgaagtaaaaggcacgcgttatcgggcattctggagccagcggcgcgct
aagaatagcccggaagggaatttgcaagctcccaaagttgaattagcactgtgcgaaaat
ggcaaaatcctggccgataaagtacgcgataaactcgatatggtggcggcaatcaccggg
ctggattttggccgttttaccaaatccatgatgctgtcacaggggcaatttgctgctttc
ctcaatgccgatgccaatgaccgcgctgaattactggaagagttaaccggtactgacatc
tacgggcggctctctgaacatgtctttgagcaacataaactggccaagactgcgctagat
gtattgcaccaacgcgctaatggtattgagttgctaaatgaagagcagcgtttagctctg
gcagaacaattaaactcactcgaagaacaagagaagcagctttccgcagcacagcgggta
aatcaaaaccaaataaattggctcgccagttggcagcaacagcaaaaaaatgtgctggaa
tatcaacagcaacagaagcttattgagcaagaatatcaccaggcacagcctgaattgcaa
caattagcccgcagtgagcccgcagaaaaactgcgccctctattgcatgagcgctcgcgc
agcctacaggatttgcagcaaatacaactgcgcatcactacactggcggggcaacagcaa
caacttcaaacgcaactcacgccactggctcgggcgctggagcaagccaatcttgctcgc
caacaacaagcagctgagcagcatgagcaagaaatactgatcgagcaaaaagtcattccg
ctggataatcttattgctcagcagcaacactcattaatgctgcttggcacgcaattacaa
cagttacaaagtaaagaacaacaaagcagacagcagcttgagctgaacgagcaacagtta
aagcaaacccaacagcgcctgcaacaactgactgaatacacccatcagtatgcccaccat
cagcactgggaaaagaatctgcctttatggcgtgagcagttccgtcaattacaaatacag
caacaacaagcagttgacagtgagcagcagcgacagcaacaagtgacgttactcacggcc
ttacaacagcaaatagacacgctgaataaacaagataaacagcagcaaacggcattagta
caagcccaatcacagacaggcagcattcagcaacaattgaccgcacttgaacaacagcac
ccctcggcacagctacgccaacaactcttcaggctccagcaacaacggcccgtgcggcag
caattagcagcattatcgccattggtgcagcaaattcaggcgctgcatgataaacagcaa
cagcaagcagcgagccagcaacagcagctcatcctgctcgaacagcagttggccgagaaa
cgtcagttatataaacaacaaaaacaacatctgacgacgctggaaactttgctggaacgc
gaaaaacaaatagtccgcttagaagcagaaagagccaaattgcaaccgggagaagcatgc
ccgctatgtggtgcattggatcacccggccattacggagtatcaggcagtaaagccctca
gagacagctatccgtgttgaggaacagcgcctacaagttgagcggctatcaactgagggt
tccgaactcaatgcccagactcaaagcttgctacaacagctcaaacatctggaacaagag
ttacaacacagcaatcagcagttgatcgattaccaacagcaatggcaaacactgacccag
ccattggagctgacatttgctttaaatgaacctgtggccttaacaatctggctggagcaa
caggaacaatcagagcaaagttgtcagctaaaactggcggaatatgaacggctgaatcag
caatatcaacaggccaaagatattctgactcaagcagaacaacagcaacaaaaacatcag
cagcaattggcattaatccttcaacgtcaacaagatacaaaggaatctcagcaaaagtca
ctggcacaatatcagcatcaacaggctgaattagcaaaaatgcgtcaagacgttagccat
gctctgactgagctatcactctcactacctgaagcagatcagcaacaaagttggttggca
tcgcgggaagcagagaatcagcgctggcaccaatatcagcaagaacaacaacagttggcg
ctggggcaaaaaacactggaaacgcagattgaaaatgaacaccgtcatttacaagaatgc
ggggaacagttatctctgctaactcaacaacatcaacaaactgaagccctgttacaacaa
caaaagcaacaacgcctcgcgctgtttggtgacggcaatgtcagtgaggtacgtcagtta
ttacgtcaacaacagcagcaagctgagctagcacagcaaaatgcagcacaagccctgcaa
caagtgcaatctcaacttaatttactctctggtgagctcgctggcctggaacagcagcaa
tgccaatatcagcagcgtgcggcgactgctcaagctgaattgcaacaagcactggcaagc
agtgaattcgacgatgaggctaccttaaccgccgcgctgttgagtgaagaggaaaggcaa
cgtttgcagcaattgaaacaacaattgagcgagcggcaacagcaggcgcacatccgccag
cagcaagccagtgaggcaatggcacaactgatacaatcctgcccagttggggtcagccaa
acatctgaactggcagccttacaactgctgtcagagcaattactcgcccaactaaaagcc
aatacattacagcaaggtgaattacgcaatcagttagaaagcgatacagttcgccgtagc
aaccaacatgcgctgtttgagcaaattgaacatagccagcaacaatatgatgactggagc
tatctcaatcatttaattggttccaaagaaggtgataaattccgcaaatttgcacaaggt
ttgaccctcgaccatttagtttatctggcaaataatcaactcagtcggctgcatggccgc
taccaattacagcgtaaagccagtgatgcgctggagctgctagtggtggatacctggcaa
gccgatgctatccgtgacactcgcacattgtcaggaggggaaagcttcttggtgagttta
gcgctggctttggcgctatcagatctggtcagtcacaaaaccagtattgactcattattc
cttgatgaaggctttggtacgctggatgctgaaacactggatattgcgcttgatgccctt
gatagcctgaatgcatcgggtaaaaccattggtgttatcagccatgttgaggcgatgaaa
gacagaatccccgtgcaaattaaggttaaaaaagtcaatggattggggattagccggtta
gataatgccttccgagtcaatcaagactga
DBGET
integrated database retrieval system
