Yersinia rochesterensis: CH54_1149
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Entry
CH54_1149 CDS
T03609
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ykr
Yersinia rochesterensis
Pathway
ykr00020
Citrate cycle (TCA cycle)
ykr00190
Oxidative phosphorylation
ykr00650
Butanoate metabolism
ykr00720
Other carbon fixation pathways
ykr01100
Metabolic pathways
ykr01110
Biosynthesis of secondary metabolites
ykr01120
Microbial metabolism in diverse environments
ykr01200
Carbon metabolism
Module
ykr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ykr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ykr_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CH54_1149 (sdhA)
00650 Butanoate metabolism
CH54_1149 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
CH54_1149 (sdhA)
00720 Other carbon fixation pathways
CH54_1149 (sdhA)
Enzymes [BR:
ykr01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
CH54_1149 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
GIDA
Pyr_redox_2
DAO
FAD_oxidored
Thi4
FAD_binding_3
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AJJ34577
UniProt:
A0A386HCZ2
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All DBs
Position
complement(1251350..1253116)
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AA seq
588 aa
AA seq
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MKLPVREFDAVVVGAGGAGMRAALQISQMGLSCALISKVFPTRSHTVSAQGGITVALGNT
HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAVLELEHMGLPFSRLEDGSIYQRPFG
GQSLNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAFVGC
TAICIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCDGPWGPHAKLKLDHLGKDVLESRLPGILELSRTFAHVDPIKEPIPVIPTCHYMMGGI
PTKVTGQAITVNEKGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGMHLQ
ESLMEQGASRDASDSDIEASLERMNRWNNTRSGEDPVEIRKALQACMQNNFSVFREGDAM
ANGLEELKTIRERLQNARLDDTSSEFNTQRIECLELDNLMETAFSTAVSANFRTESRGAH
SRFDFPERDDANWLCHSLYLPDTESMTRREVNMQPKLRAAFPPKVRSY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgccggtcagagagtttgatgctgttgttgttggtgcgggcggcgcaggtatg
cgcgcggcactgcaaatttcacaaatggggctgtcgtgcgccctgatatccaaagttttc
ccaacccgttcccataccgtatctgcgcaagggggtatcactgttgcgctgggtaatacc
catgaagataactgggaatggcatatgtatgacacggtaaagggttccgattatatcggt
gaccaggatgccattgagtatatgtgtaaaaccggccctgaagctgtccttgagctggaa
cacatggggctacctttctcccgtttagaagatggcagcatttatcagcggccatttggt
gggcagtcgctcaactttggcggtgagcaagcggcgcgtactgcggcggcggctgaccgt
accgggcatgcactgttacacaccctttatcagcaaaacctgaaaaatcacaccacgatt
ttctccgaatggtatgcactggatttagtgaagaatcaggacggcgcttttgtgggctgt
accgctatctgcattgaaaccggtgaagtggtctatttcaaagcgcgggcgactgtgctg
gcgaccggcggtgctggacgtatttaccagtcaaccaccaatgcgcacattaataccggt
gacggtgtgggcatggccctgcgtgccggtgttccggtgcaggacatggaaatgtggcaa
ttccacccgacgggtatcgccggggcgggtgtgttggtgaccgagggttgccgtggtgaa
ggcggttatctgctgaataaacacggcgagcgctttatggagcgttatgcgccaaacgcc
aaagatttggcgggtcgtgatgttgtcgcgcgctccattatgattgaaatccgtgaaggc
cgtggttgtgatggcccgtggggcccgcatgctaaattgaagttggatcacttgggtaaa
gatgtgctggaatcccgcctgccgggcattcttgagctatcacgcacctttgctcacgtt
gacccaattaaagaaccgatcccggttatcccaacttgtcattatatgatgggcggaatt
ccgaccaaagtaactggccaggccattacagttaatgaaaagggtgaagatgttgtcatc
ccaggtttgtttgctgtgggtgaaattgcctgtgtttccgtccacggtgcaaaccgtttg
ggaggtaactcattgctggacttggtggtatttggtcgcgcagccggtatgcatctgcaa
gagtctttgatggagcagggcgctagccgcgatgccagtgattctgatatcgaagcatca
ctggagcgcatgaaccgttggaataacacccgctcaggtgaagacccggttgagatccgc
aaagcattacaggcctgtatgcagaataacttctcggtgttccgtgaaggtgatgctatg
gccaatggtttggaagaactaaaaactatccgcgaacgtctgcaaaatgcccgtttggat
gacacctccagtgaattcaatacccagcgtattgaatgtctggaattggacaacctgatg
gaaaccgcgttttccactgccgtgtctgcaaacttccgtaccgaaagccgtggcgcgcat
agccgcttcgacttcccggaacgtgatgatgctaactggttgtgtcactcgctctatttg
ccagacaccgaaagcatgacccgccgtgaggtaaacatgcaacctaagctacgcgcggcc
ttcccgccgaaagtgcgttcttactaa
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