Yersinia rochesterensis: CH54_12
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Entry
CH54_12 CDS
T03609
Name
(GenBank) ompA-like transmembrane domain protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
ykr
Yersinia rochesterensis
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ykr02000
]
CH54_12
Transporters [BR:
ykr02000
]
Other transporters
Pores ion channels [TC:
1
]
CH54_12
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Ortholog
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GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
DEC-1_N
DUF1507
DUF2490
AAA
Motif
Other DBs
NCBI-ProteinID:
AJJ35379
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All DBs
Position
complement(12221..13297)
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AA seq
358 aa
AA seq
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MKKTAIALAVALAGFATVAQAAPKDNTWYTGGKLGWSQYQNTGTGGIYGDQGNDGPTHKD
QLGAGAFLGYQANQYLGFEMGYDWLGRMPYKGDVRNGDFKAQGVQLAAKLSYPIAQDLDL
YTRLGGMVWRADSSAFNAASGTRLNNHDTGVSPLVALGAEYAWTKNWATRMEYQWVSNIG
DKATVGARPDNGMLSVGVSYRFGQEDAVAPVVAPAPAPAPVVDTKRFTLKSDVLFAFNKS
TLKAEGQQALDQLYSQLSSIDPKDGSVVVLGFADRIGQPAPNLALSQRRADSVRDYLVSK
GIPADKITARGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIEVKGYKEVVTQPQA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagacagctatcgcattagcagtggcactggctggtttcgctacagtagcgcaa
gccgcaccgaaagataacacctggtacaccggtggcaaactgggctggtctcagtatcaa
aatactggcactggcggtatctatggcgaccaaggcaatgacggtccaactcataaagac
caattaggtgctggtgcgttcttgggttaccaagcaaaccaatacctgggctttgaaatg
ggatacgactggcttggccgtatgccttacaaaggcgacgttcgtaacggcgactttaaa
gcacaaggcgttcaactggctgcaaaactgagctacccaattgctcaggacctggacctg
tacacccgtctgggtggtatggtttggcgtgcagactccagcgcgtttaacgcagcttct
ggcacacgtttgaacaaccatgacaccggtgtttctccattggtagctctgggtgctgaa
tacgcatggaccaagaactgggcaacccgtatggaataccaatgggttagcaacatcggt
gataaagctaccgttggtgctcgtccagacaacggcatgctgagcgtaggtgtttcttac
cgtttcggtcaggaagatgcagtagctccagtagttgctccagcaccagctccagctcca
gttgttgacactaagcgtttcactctgaaatcagacgtgttgttcgctttcaacaagtca
actctgaaagcagaaggccagcaagctctggatcaactgtattcacagctgagctctatc
gatcctaaagacggttctgtagttgttctgggcttcgctgaccgtatcggtcaaccagct
cctaacttagctctgtctcagcgtcgtgctgacagcgtacgtgattacctggtttctaaa
ggtatccctgctgacaaaatcaccgctcgcggtgaaggccaagcaaacccagttacaggc
aacacctgtgacaacgtgaaaccacgtgctgctctgattgagtgcctggcaccagatcgt
cgcgtagagatcgaagttaaaggctacaaagaagttgtaactcagccacaggcttaa
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