Yersinia rochesterensis: CH54_1381
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Entry
CH54_1381 CDS
T03609
Name
(GenBank) deoR-like helix-turn-helix domain protein
KO
K02468
DeoR family transcriptional regulator, glucitol operon repressor
Organism
ykr
Yersinia rochesterensis
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ykr03000
]
CH54_1381
Transcription factors [BR:
ykr03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
CH54_1381
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_PafC
HTH_11
FeoC
HTH_IclR
GntR
HTH_5
MarR
HTH_24
DsrD
DUF3731
Put_DNA-bind_N
SpoIIID
HerA_C
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AJJ35154
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Position
1495591..1496361
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AA seq
256 aa
AA seq
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MKPKQRQVAILEYLQQHGKTAVDQLAAHFSTTGTTIRKDLTSLENEGAVIRTYGGVVLNR
DDVEQPIDRKTHINTEKKKQIAKAASKLIKDGDSLVFDAGSTVLQMVPHLTKFNNITVMT
NSLHIVNELVELDNDQTILMPGGTYRKGSASFHGSLAESAFDNFSFDKLFIGADGVDLKA
GVTTFNEVYHVSTAMCHAASRIILLVDSSKFGRKSPNVVCALSAVDTLITDKGISDEYLQ
ELQKMGINIILVDKDD
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaaagcagcgacaagtcgctatcctggaatatctccagcagcacggtaaaacg
gcggttgatcaacttgccgcccatttttcgaccactggcacgacaatccgcaaagattta
accagcctcgaaaatgaaggtgcagtgattcgcacctatggcggggtagtattaaatcgt
gatgatgttgagcaacccatcgaccgtaaaacccatataaataccgagaagaaaaaacaa
atcgccaaagcggccagtaagctgattaaagatggcgatagtctggtttttgatgcgggc
agtaccgtactgcaaatggtgccgcacctgactaaattcaataatattacggtgatgacc
aacagcttgcatatcgtcaatgaattggttgagctggataacgatcagactatcttgatg
ccgggcggcacttatcgtaaaggttcagcatcttttcatggtagcttggcagaatccgcc
tttgataacttcagcttcgacaagctctttatcggcgcagatggcgtcgatctcaaagca
ggtgtcaccacgtttaacgaagtttatcatgtcagtaccgctatgtgtcacgccgccagc
cgtattattctgctggtcgactcttccaaatttggccgtaaaagtcccaatgttgtttgt
gcactgagtgccgtcgatactctgattaccgataaaggtattagcgacgaatatttgcag
gaactgcagaaaatgggcattaacatcattctggttgataaagatgactaa
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