Yersinia rochesterensis: CH54_1490
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Entry
CH54_1490 CDS
T03609
Name
(GenBank) bacterial regulatory s, luxR family protein
KO
K19734
LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
Organism
ykr
Yersinia rochesterensis
Pathway
ykr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CH54_1490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ykr03000
]
CH54_1490
Transcription factors [BR:
ykr03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
CH54_1490
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Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
HTH_38
HTH_40
Sigma70_r4
HTH_24
HTH_23
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AJJ35089
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Position
1614355..1615071
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AA seq
238 aa
AA seq
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MNKLFFKNKLINSSIKKQLERKLEKYNNIKYAYAIMNKRNPCDFTAISNRDKWVDFYIQN
NFQFIDPVLLTAAHRVTPFSWDENIILKSPKLFDLAKQHDFINGYTFVLHDQNSNLVVLS
LMIGKDVDVEKEFDQEKGNIQLLLMNTHEELTSLYNDVNSTNYFYKMNKNEIFSKRENEI
IYWASVGKSYQEIALILGIQPTTVKHHMGRAVRKQGVTNAKYAISLAVELQLIKPVYY
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaattatttttcaaaaacaaattaattaattctagcataaagaaacaacttgaa
cgaaaactcgaaaaatacaataatatcaaatatgcatatgcaatcatgaacaagagaaat
ccttgtgattttacggctatttccaatagagataaatgggttgatttttatatacagaat
aactttcagtttatagatccggttcttcttactgcagcacatcgggttacacctttttct
tgggatgaaaatattatattaaagtcacccaaattatttgatttggctaagcagcatgat
tttattaatggatatacctttgtcctacacgatcaaaactcaaacttagtcgttctttct
ctgatgataggcaaagatgtcgatgtggaaaaagagttcgatcaggaaaaaggtaatatc
cagttgctattaatgaatactcatgaagaactgacctcactttataacgatgttaatagc
actaattatttttataaaatgaataaaaacgaaattttttcaaagcgtgaaaatgagatt
atttattgggcaagtgttggtaaatcctatcaagaaatagctcttattttaggaatacaa
cccaccacagtaaaacaccatatggggagagcggttagaaaacaaggagtaacaaatgcc
aagtatgctataagccttgctgttgagttgcaattgattaaacccgtttattactaa
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