Yersinia rochesterensis: CH54_1563
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Entry
CH54_1563 CDS
T03609
Name
(GenBank) bacterial extracellular solute-binding s, 5 Middle family protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ykr
Yersinia rochesterensis
Pathway
ykr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CH54_1563
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ykr02000
]
CH54_1563
Transporters [BR:
ykr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CH54_1563
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
UBA_4
Motif
Other DBs
NCBI-ProteinID:
AJJ36972
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All DBs
Position
complement(1686550..1688127)
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AA seq
525 aa
AA seq
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MSKRLWLRNTLLTAALLSAFSVPVSATTHTLQLAIGDEPTEGFDPMLGWSHGSYLLLHSP
LLKQNEDLSWNSFLLNDYKTSNDGKTWTLTLKPDLKFSDGSPLTAKDVVFTYNNAAASGG
KVDMGNFLGAEEIDPVNVRIQLKAPQSTFVNVLGSLGIVSADKYDAKTYAQKPIGAGPYR
LVSFQPGQQMIVEANPYYSGNKNDFDKLIFVFLDEDSAFAAAQSGQLGVVRIPPSMAVGP
VNNMKLWVRPSVENRGIVFPTLPAGKKDAQGYPIGNDVTADVAIRRAINYTINRQLLADQ
IMEGHAIPAYTGVQGLPWNNPDSAIKDGDIETAKQILEQAGWTLNSAGIREKNGVPAKIT
LWYTSGDTTRRDLAQAIRSMLKPIGIEVDLKSGSWETVERNMHANPTLFGWGSLDPMELY
HHYSSKAAGVEYYNPGYYQNPVVDKHLQQALDAPTWQQAVPFWQQVDWDGTTGTGIRGDA
AWAWLLNIQHTYLANKCVDLGKGAPEIHGSWSLLNSLDSWKWTCQ
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgtctatggctccgaaataccttgctgacagccgctttattaagtgctttt
tctgttccagtgagtgccacaactcacacactacaattggctatcggtgatgagccgacc
gaaggttttgaccccatgctcggctggagccatgggagttatctgctgctgcatagccct
ttactcaaacaaaatgaagatctcagctggaatagttttttgctgaatgactataaaacc
agcaatgacggcaaaacctggactctgacacttaaacctgacctcaaattctccgacggt
tcacctctgacagccaaagatgtggtgtttacttacaacaatgcggcggccagcggcggc
aaagttgatatgggtaacttccttggcgcagaagaaattgaccctgttaatgttcgtatt
caactgaaagcgccacaaagcacttttgtgaatgttttgggttcactgggtattgtttca
gcggataaatacgacgcaaaaacctatgcacaaaagcctattggtgctggcccctaccgc
ctagtgagcttccagccgggccaacaaatgattgtcgaagcgaacccttactattcgggt
aataaaaatgatttcgataagctaatttttgttttccttgatgaagacagtgcttttgca
gcagcccaaagtgggcagttaggtgtcgtccgtattcctccatccatggcggttggcccg
gttaataatatgaagttatgggtcaggccaagtgtagaaaaccgcggcatcgtattcccg
acccttccggcaggtaaaaaggatgcacagggttacccgattgggaatgatgtcactgcg
gatgtcgcgattcgccgtgccattaactataccatcaaccgccaactgttggccgaccaa
atcatggaggggcatgcaatccccgcctataccggcgtgcagggtttgccatggaataat
ccggattctgccatcaaagatggtgatattgaaacagccaaacagatattggagcaagct
ggctggacgctaaacagtgcgggtatcagagagaaaaatggcgtcccggccaaaatcaca
ctttggtataccagcggggacaccactcgccgcgacttagcgcaggcgatacgttccatg
ctcaaacctatcggtattgaggttgatttgaaatccggtagttgggaaaccgtagagcgg
aatatgcatgccaatcctaccctgtttggttggggaagcctcgacccgatggagctttat
catcattacagcagcaaagcggcgggtgtggaatattataatcctggctactatcagaac
ccggtagtggataaacatctgcaacaagcgctggatgccccaacctggcagcaagccgtg
ccgttctggcaacaagtggattgggatgggacgaccggtaccggtattcgtggcgatgcg
gcatgggcatggttactgaatattcagcatacttatctggcgaataaatgtgtcgattta
ggtaagggagcgccggaaatccacggctcgtggtcgctgctcaatagccttgatagctgg
aaatggacttgtcagtaa
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