Yersinia rochesterensis: CH54_1589 Help Entry CH54_1589         CDS       T03609                                  Name (GenBank) lysM domain protein   KO K08307   peptidoglycan lytic transglycosylase D [EC:4.2.2.29] Organism ykr  Yersinia rochesterensis Brite KEGG Orthology (KO) [BR:ykr00001]  09180 Brite Hierarchies   09181 Protein families: metabolism    01011 Peptidoglycan biosynthesis and degradation proteins [BR:ykr01011]     CH54_1589 Enzymes [BR:ykr01000]  4. Lyases   4.2  Carbon-oxygen lyases    4.2.2  Acting on polysaccharides     4.2.2.29  peptidoglycan lytic transglycosylase      CH54_1589 Peptidoglycan biosynthesis and degradation proteins [BR:ykr01011]  Peptidoglycan biosynthesis and degradation   Lytic transglycosylase    CH54_1589 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SLT LysM LysM_RLK LysM3_LYK4_5 NMB0315_dom_I LysM1_NFP_LYK DUF3071 HTH_Tnp_ISL3 Motif Other DBs NCBI-ProteinID:  AJJ36574 UniProt:  A0ABN4FGB5 LinkDB All DBs Position 1708140..1709570 Genome browser AA seq 476 aa AA seqDB search MIARLLSNYIDTHMKTKAIFLASVLLVGCQTSKTGVQAPVQHAQSLSSAGQESEAGEYTN SAREGSARWLDSDSGLAQQDLWNFISDELKMKVPENSRIREQKQKYLKNKSYLHDVTLRA EPYMYLIVEQIKKRNMPMELVLLPIVESAFDPHATSSANAAGLWQIVPSTGRNYGLKQNQ WYDGRRDVVASTKAALDIMERLNKMFDGDWLLTVAAYNSGEGRVMQAVKANKAKGKPTNF WALSLPRETSIYVPKMLALGDLIKNSKKYGINLPDTDKDRALARVDVGQQIELTQAAEMA GMSLTKLKSFNSGYKRNVTAPAGHGPRYIMLPKSHAEQLKDSLADTDIAAVQPTKLAQNS TKSASNSQYKVRPGDTLSTIAKRLNIKTSDLQSWNNLHAKSTLKVGQTLQLASNTTSSNS ITYQVRKGDSFASIAKRHGVNTDDVMRWNSVVSKANKLLPGLNLTLFVNGKSTPDA NT seq 1431 nt NT seq  +upstreamnt  +downstreamnt atgattgctcgtcttttaagcaactacattgacacacacatgaagaccaaagcgatattt ctcgcctcagtcttgcttgttgggtgccagacgtccaagacgggcgttcaggctcctgta cagcatgcacagagtttgtcttcggcaggtcaagaaagtgaagcaggagagtacacaaat agcgcccgagagggtagcgcgcgatggctggatagtgacagtggcctcgcgcagcaagat ttgtggaacttcattagcgacgagctgaagatgaaggttccggaaaattctcggatccgt gaacagaaacaaaaatacttaaaaaataagagctatctccacgatgtaacattacgggca gagccgtacatgtacctgatagtcgagcaaattaagaaacgtaatatgccgatggagctg gtactgctacccatagtggagagcgcttttgacccacacgcgacatcatccgccaacgcc gcagggctgtggcagatagtgccaagtaccggtcgaaattatggcttgaaacaaaaccaa tggtatgacggccgcagagatgtggtggcgtctaccaaagcagcgcttgatataatggag cgcctgaacaagatgtttgacggtgactggttgttaacagtcgctgcctataacagcggt gaaggcagagttatgcaagcggtgaaagcaaataaggcaaagggtaaaccgacgaacttt tgggcattgtcgcttcctcgtgaaacgtcaatttatgttccaaaaatgctggccttgggt gatttaatcaagaacagcaaaaagtacggtataaacttgcctgacaccgacaaagaccgt gcattagcgcgcgttgatgttggtcagcagatagagctaactcaggcggctgagatggcg gggatgtcactgacaaagttgaaatcctttaattctgggtataagcgcaatgtaacggca ccagctggacacggtcctcgttatattatgttgccgaaatcccatgctgagcagcttaaa gattcattggcagatactgatattgccgcagttcaaccaaccaagttggcacagaacagc acaaaatcagcatcaaactcgcagtataaagttcgccccggcgacaccttatctacgata gccaagcggttgaatatcaagaccagcgatttgcagagttggaacaacttacatgccaag agcaccttaaaagttgggcaaaccctgcaactggcaagcaatacaactagcagcaacagc atcacctatcaagttcgtaaaggtgattcttttgccagtattgccaagcgtcacggtgta aacaccgacgatgtgatgcgatggaattcggtagtcagcaaagctaataaattgctgcca ggtttgaacttgacgctgttcgttaacggcaaatcaaccccggacgcataa

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