Yersinia rochesterensis: CH54_1680
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Entry
CH54_1680 CDS
T03609
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
ykr
Yersinia rochesterensis
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ykr03021
]
CH54_1680 (rpoS)
Transcription machinery [BR:
ykr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CH54_1680 (rpoS)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AJJ36556
UniProt:
A0A0T9PJZ3
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Position
complement(1806846..1807844)
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AA seq
332 aa
AA seq
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MSQNTLKVNELHEDADFDENSTETEIFDEKASVEDEPTESELAEDELLAQGVTQRVLDAT
QLYLGEIGYSPLLTAEEEVYFARRALRGDVPSRRRMIESNLRLVVKIARRYSNRGLALLD
LIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVY
LRTARELSHKLDHEPSAEEIAEQLDRPVDDVSRMLRLNERITSVDTPLGGDSEKALLDIL
SDENENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLT
RERVRQIQVEGLRRLREILQAQGLSIEALFRE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaatacgctgaaagttaacgagttgcatgaagatgctgattttgatgaaaac
agtacggaaactgaaattttcgacgaaaaagcatcagtagaagatgaacctactgaaagc
gagttagcagaagatgagctgttggcgcaaggtgttacccagcgagtgctggatgcaacg
cagctctatcttggtgagattggttattcaccgttattgaccgcagaagaagaggtttat
tttgcccggcgtgcattgcgcggagatgtgccttcacgccggcgtatgatcgaaagtaac
ttgcggttggtggtgaagatcgcccgccgttacagtaatcgcggtttagcgctgctggat
ttgattgaagagggtaaccttggcttaatccgtgcagtggaaaaatttgaccctgaacgc
ggtttccgtttctccacttatgccacttggtggatacgccagacgattgaacgggcaata
atgaaccaaacccgtactatccgtttgcctattcatatcgttaaagaattaaacgtttat
ttgcgtacagcgcgagagctttcccataagttggatcatgaaccgagtgcggaagagatt
gctgagcaactcgacagaccggtcgacgatgtgagccgtatgttacgccttaatgaacgt
atcacttctgttgatacacctttaggcggcgactcagagaaagccttattagatattctg
tctgacgaaaatgaaaacggcccagaagatacgacgcaagacgacgatatgaagcaaagt
atcgttaaatggctgtttgaattgaatgcaaaacagcgcgaagttttggcccgtcgtttt
ggtctgttagggtatgaagctgcaacattagaagatgttggtcgtgagattggtttaaca
cgtgaacgtgtgcgccagattcaagttgaaggtttacgtcgtttgcgggaaattctgcaa
gcacagggcctgagcattgaagcattgttccgcgaataa
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