Yersinia rochesterensis: CH54_1906
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Entry
CH54_1906 CDS
T03609
Name
(GenBank) periplasmic binding domain protein
KO
K10555
AI-2 transport system substrate-binding protein
Organism
ykr
Yersinia rochesterensis
Pathway
ykr02010
ABC transporters
ykr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CH54_1906
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CH54_1906
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ykr02000
]
CH54_1906
Transporters [BR:
ykr02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
CH54_1906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Glyco_tran_WecG
Motif
Other DBs
NCBI-ProteinID:
AJJ34970
LinkDB
All DBs
Position
2086724..2087758
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AA seq
344 aa
AA seq
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MKTPRLKKLALICALGFAGITFSAINAAQAAERIAFIPKLVGVGFFTSGGKGAVDAGKEL
GVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIVVSAVSPDGLCPALKRAMQRGVKILTWD
SDTKPECRSLYINQGTPNQLGSMLVDMAANQVKKDQAKVAFFYSSPTVTDQNQWVNEAKK
KIQQEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLK
RDNVAIVGFSTPNVMRPYVQRGTVKEFGLWDVVNQGKISVYVANEMLKKGDLNVGDKIDI
PNIGVVEVVPNSVQGYDHEAKGNGIVLLPQRVIFTKENIDKYDF
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaccaagattaaaaaagctggcgctgatttgtgccctcggatttgccggtatc
acttttagcgctataaatgccgcgcaagccgcggaacgcatcgcatttatcccgaaatta
gtcggggtgggcttctttaccagcggcggtaaaggtgccgtcgatgccgggaaagagctg
ggggtggatgtcacctatgatggcccgaccgaaccgagtgtctccggtcaggttcagtta
attaataactttgttaatcagggctataacgccattgtggtctctgcggtttcacccgat
ggcctgtgtccggcattaaaacgcgctatgcagcggggggtcaaaatcctgacctgggac
tctgacaccaaacccgaatgtcgctcgctgtatatcaaccagggaacgcccaatcaactg
ggatcaatgctggttgatatggcggccaatcaggtgaaaaaagaccaagccaaagtcgca
tttttctattccagcccgacagtcaccgaccaaaaccaatgggtgaatgaggcgaaaaag
aaaatccagcaagaacaccccggctgggaaattgtcaccacccagtttggctataacgac
gccaccaaatcactgcaaaccgctgagggtattttgaaagcctatagcgatttggatgcg
attattgccccagatgccaacgccctgcccgctgcggcgcaagcagcagaaaacctcaaa
cgcgacaatgtggcgattgtcggcttcagcaccccgaatgtgatgcgcccttatgttcaa
cgcggcacggtcaaagaattcggcctatgggacgtggttaaccaaggcaaaatctcagtg
tatgtcgccaatgagatgctgaaaaaaggcgacctgaatgtcggcgataaaattgatatc
ccgaacattggtgtggtcgaggtggtgcccaacagtgttcagggctatgaccatgaagct
aaaggcaacggcattgtgttactgccacagcgggtcattttcaccaaagagaacatcgac
aaatacgatttctaa
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