Yersinia rochesterensis: CH54_222
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Entry
CH54_222 CDS
T03609
Name
(GenBank) iclR helix-turn-helix domain protein
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
ykr
Yersinia rochesterensis
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ykr03000
]
CH54_222
Transcription factors [BR:
ykr03000
]
Prokaryotic type
Helix-turn-helix
IclR family
CH54_222
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
TrmB
HTH_24
HTH_5
MarR_2
Rrf2
Fe_dep_repress
Mga
PadR
HTH_45
HTH_11
MarR
Motif
Other DBs
NCBI-ProteinID:
AJJ34872
LinkDB
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Position
230373..231164
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AA seq
263 aa
AA seq
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MAIADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMPKSTVYRFLQTMKSLGY
VAQEGESEKYSLTLKLFELGAKALQNVDLIRSADIQMRELSNETRETIHLGALDEDSIVY
IHKIDSMYNLRMHSRIGRRNPLHSTAIGKVLLAWRDRGEVEEILSHVEFTRSTKHTLGSA
TELLPVLDQVREQGFGEDIEEQEEGLRCIAVPVFDRFGVVIAGLSISYPTLRFSEDSKSN
IVKSLHRAARNISEQMGYRDYPF
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggctattgcagatttagataaacagcccgactctgtttcgtcggttctgaaagttttt
ggcatcttacaagccttgggtgaagagcgggaaataggtattaccgagctttctcagcgt
gtaatgatgcctaagagtaccgtgtaccgcttcctacagaccatgaaatctttgggatat
gtcgcacaggaaggcgaatcagagaagtattccctgactctgaagttatttgagttaggc
gctaaagcattacaaaacgtcgatttgatccgtagcgctgatatacaaatgcgtgaatta
tccaatgaaactcgtgaaactattcacttgggtgccttggatgaagatagcatcgtttat
atccataaaatcgattctatgtataacctgcggatgcattctcgtatcggccgtcgtaac
ccgctgcacagtactgccattggtaaggtattgttggcgtggcgtgatcgcggcgaagta
gaagaaatcttgtctcatgtcgagtttacccgcagcaccaaacacacgctgggcagtgca
acggaactgttgccggtgttagatcaggttcgtgagcaaggcttcggtgaagatatcgaa
gaacaagaagaaggtttacgttgcattgctgtgccggtttttgaccgtttcggtgtcgtc
attgcgggtttaagtatttcatatccgacgttgcgattctctgaagatagcaagagtaat
attgtgaaatctttgcatcgcgctgcacgtaatatttctgagcaaatgggctatcgcgat
tatcctttctga
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