Yersinia rochesterensis: CH54_2405
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Entry
CH54_2405 CDS
T03609
Name
(GenBank) tetratricopeptide repeat family protein
KO
K20543
cellulose synthase operon protein C
Organism
ykr
Yersinia rochesterensis
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ykr02000
]
CH54_2405
Transporters [BR:
ykr02000
]
Other transporters
Pores ion channels [TC:
1
]
CH54_2405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCSC_C
TPR_19
TPR_14
TPR_2
TPR_16
TPR_11
ARM_TT21_5th
TPR_12
TPR_CcmH_CycH
TPR_7
TPR_1
TPR_Slam
ARM_TT21_2nd
TPR_8
BTAD
TPR_20
TPR-S
HAT_PRP39_C
TPR_15
TPR_17
DUF6584
HrpB1_HrpK
ARM_TT21
TPR_6
Motif
Other DBs
NCBI-ProteinID:
AJJ34493
LinkDB
All DBs
Position
complement(2602691..2606173)
Genome browser
AA seq
1160 aa
AA seq
DB search
MRNIKINWLLSLVLLPQAFVGMAQGAEAVSPTQFLLEQVRLGEATNKDELVKQSLYRLNM
MDPNNPDVIAAGIRQALRQGNLAEAQKQLDKLQQLAPDTEVYRRAKLMLAMTKPEVRQQL
QEARLLATAGRVAEAKVKYDQLLQGNPPTLDLAVEYWRLVARLPGQEALATQKLASLDQQ
YPGNVALRMALARMYFSQQKAVLGYAMLEKVAADPTGASDAADLWMDTTKAMTVSPQSVA
ALTHFLDVFSTGPQADAARKELANQQVTLADPAYQARLSGLEKVDSGEGTGAIPALKQAL
AASPNDPEILGALGLAYARGGDRAQALQLFEQAQKSDKDGLKSDKWASLIKTNRYWLLND
AGDKALKAGNTALAQQKYQQARQIDGSDSYALIGLGDVAVARHDDKSAEQHYQQALRLDP
SNSTAVRGLANIYQRESPQKALDYLNNLPRSQQAKMRDTLDNLQLESLKQQAETLAAQQQ
WQQAAEKYRQAQQRAPDDVWITYRLAQALAQEGQTAQADAQFHQLASRKPGDPEQVYAYA
LYLSSTERDSQALAHLTTLPTAQWNDNIRELDQRLKLGQVLTLARQLRASGDEAGAITAL
RQQPANTQIDLTLADWALERGDYSAALAGYQHVRAREPQNPDARLGEIEAYIAEGRLSEA
RQHLQTEPLTGDGASLNTQRRVANAWSGVGEPHKAADIFQRLKPAAAKGTPSQDNALIFR
DSARLAQLQGQPAAAQDDFKQAMVASGIAAKLPADNDSYTLLTRNQATDDWLKRGIRADA
ADLYRQQDTRVTLDQDYLHSSGTEGISDLSAYNTMLQVDTSLADGRVFFRTDTVHMDAGT
FDKNTRYKAGTCYKTEIPCQTNLHQRATGTSVAVGWQNDSWATDIGTTPMGFEVVDVVGG
LAYSNSWDHIGWTATASRRPISNSLLAFAGSKDPNTNITWGGVRASGVSLGASYDRGEAN
GVWSDLSYHYLTGKNVADNQRLRFMTGYYYKLINEDNRRFTVGLNGMWWHYQKDLSGYTL
GQGGYYSPQKYLSLAIPVNYRERTDNWSWELGGSVSVSHSATNDRARYPLQNLLNNSLQP
IPDRGDPDYGDSSNGVGYTLRALIERRLSSHWTLGAGVDIQQAKDYTPSHALIYLRYSMA
GWQGDLDMPPQPLVPYSDFK
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacattaaaataaactggctattaagtttggtgttattgcctcaagcctttgtc
ggtatggcgcagggggctgaagctgtgtcgccgactcaatttttactcgagcaggtgcga
ttgggggaggcgaccaataaagatgagttggtgaagcaatccctgtatcgcctaaacatg
atggacccgaataatccggatgttatcgcggcaggaattcgccaggcgctacggcaaggg
aatctggccgaagcacaaaaacaactggataagttgcaacaattggcacccgacactgaa
gtatatcgccgcgctaagttgatgttagccatgacaaaacctgaagttcgtcagcaattg
caggaggcccgtctactggcaacggcggggcgggttgctgaagctaaagttaaatatgat
caattgctgcaaggcaatccaccgactctggatctggcggttgagtattggcggctggtg
gcgcgactacccggtcaggaagcccttgcgacccagaaactcgcctctctggaccaacaa
tatcccggcaatgttgccctgcgcatggcgctggcgcgtatgtatttcagccaacaaaag
gccgtacttggctacgccatgttggaaaaagtggccgcagaccctaccggggcttcagat
gctgctgatttgtggatggacaccaccaaagcgatgaccgtcagcccgcaaagtgttgcc
gcattgacccattttcttgacgttttttccaccggccctcaagcggatgctgctcgtaaa
gagttggctaatcagcaggttacattggctgatccggcctatcaggcgcggttgagcggg
ctggaaaaagtcgacagtggcgaagggacgggtgccatccctgcattgaaacaagcattg
gccgcctcacccaatgacccggaaattctgggcgcgctgggtctggcgtatgctcgcggt
ggcgatcgcgcgcaagcattacagttatttgaacaggcgcaaaaatcggataaagacggc
ctgaaaagtgataaatgggccagtttgatcaaaaccaaccgttactggctgctgaatgat
gccggtgataaggcgctgaaagccggtaacactgcgttggcacagcaaaaatatcaacaa
gcgcggcaaatcgacggcagcgacagttatgcattaattggtttgggtgatgtggcagtg
gcccgtcatgatgataaaagtgccgagcagcattatcagcaagcattgcgtctcgatccc
agcaacagcaccgcggtgcgcgggcttgccaatatttatcagcgggaatcaccacaaaaa
gcactggattacctgaataacttgccccgcagccaacaagccaaaatgcgcgacacatta
gataacttgcaattagagagtctgaaacagcaagccgaaaccttggcggcacagcagcag
tggcagcaggcagcagagaaatatcggcaggcgcaacagagagcgccggacgatgtctgg
ataacttatcggctggcacaagcattggcgcaagagggccagacggcgcaagcggatgca
caattccaccaactggccagccgtaaaccgggcgatcctgaacaggtctatgcctatgcg
ctttacctttccagcaccgagcgggatagtcaggcattggcgcatttaaccacactgccc
acggcgcaatggaatgataatattcgtgaattagaccagcgcttgaaattgggtcaagtg
ctgactttggcccgccaattgcgggcaagtggtgatgaagcgggggccatcaccgccttg
cgccagcaacccgctaacacacaaattgacctgacactggcagattgggcgctggaacgc
ggcgactacagcgcagcgctggcgggttatcagcatgtccgggcgcgtgaaccgcaaaat
cctgatgcgcgtttgggcgagattgaagcctatatcgccgagggccgcctcagcgaggcg
cgtcagcatttgcaaactgagccactgacgggcgacggggcgagcttaaatactcagcgg
cgggtcgccaatgcctggagtggtgtgggtgaaccacacaaagcggcagatattttccag
cggttaaaaccagccgccgccaaaggcaccccatcacaggataatgctttaatattccgt
gattcggctcggctggcgcaattacagggccaacccgctgccgctcaggatgacttcaag
caggcgatggtggccagcggcatagcggctaagcttccagcagataatgacagttatact
ttactgactcgtaatcaagccacggatgattggctcaaacgcgggattcgtgctgatgct
gcggatctgtatcgtcagcaggatacccgcgtcacattggatcaagactatctgcattca
agtggcactgaagggatttcagatctcagcgcctacaacaccatgctgcaagtggatact
tcgctagctgatggtcgggtgttcttccgcactgacaccgtgcatatggatgctggcacc
tttgacaaaaatacccgttataaagcaggcacttgctacaaaactgagattccttgtcaa
acgaatttacatcaacgggccactggcaccagtgtcgcggtggggtggcaaaatgacagt
tgggccacagatattggcaccacgccgatgggctttgaggtggtcgatgtggtggggggg
ctggcgtacagcaacagttgggaccatattggttggacggcaacggcttcgcggcggccg
atatccaactcattattagcttttgccggtagcaaagaccccaataccaatatcacttgg
gggggcgtgcgcgccagtggtgtcagcttgggagccagttatgaccgcggggaagctaac
ggggtctggagtgatttgagctatcattatctcaccgggaaaaatgtggccgataaccag
cggctgcgctttatgactggctactactacaagctaatcaatgaggataaccgccgtttt
accgtcggtttgaatggcatgtggtggcattaccaaaaagatctcagcggctacacgttg
ggccagggcgggtattacagcccacaaaagtatctgtcactggctatcccggtaaattat
cgggagcggacagataactggtcgtgggaattgggtgggtcggtgtctgtttcacactct
gcgaccaatgatcgggcgcgttatccactgcaaaatctgctcaataatagcttgcagcct
attccagatcgcggtgatcccgattatggtgacagcagcaatggcgtgggttacaccttg
cgagctttgattgagcgccgcctgagttcgcactggacactgggggccggagttgatatc
cagcaagctaaagattataccccaagtcatgcgctgatttacctgcgctactctatggcg
gggtggcaaggtgacttggatatgccgcctcagccattggtgccttactccgactttaag
taa
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