Yersinia rochesterensis: CH54_2549
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Entry
CH54_2549 CDS
T03609
Name
(GenBank) bacterial regulatory s, lacI family protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ykr
Yersinia rochesterensis
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ykr03000
]
CH54_2549
Transcription factors [BR:
ykr03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CH54_2549
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_38
HTH_Tnp_ISL3
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AJJ36311
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Position
2774389..2775381
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AA seq
330 aa
AA seq
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MKDVARLAGVSTSTVSHVINKNRFVSDPIRDKVLAVIKQLNYAPSALARSLKLNETRTIG
MLVTASSNPFYAEVVRGVERSCYERGYSLILCNTEGDIDRMSRSIETLMQKRVDGLLLMC
TESHRPSQDILRCYPSLPIIMMDWAPFEGVNDVIQDNSLLGGEMATSYLIARGYARIACI
AGPQDKTPAKERLEGYRQAMERAGLPVLPGYEVASDFEFGGGLVAMKQLLALPQPPEAVF
TSNDAMAVGVYQALHQAGLSIPQDMAVIGYDDIEIAQYMTPPLTTIHQPKDSLGELAIDT
LIYRLNNPETEPQVLILTPELIERGSVVTH
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatgtcgcccgtttagcgggcgtatcaacctcaactgtctcgcatgttattaat
aaaaatcgttttgttagcgatcctattcgcgacaaagtgctggctgtcatcaagcaactc
aactatgccccgtctgcattggcgcgtagtttaaaactcaatgaaacccggactatcggc
atgttggtcacggccagtagcaacccattttacgccgaagtggttcgtggtgtggagcgc
agttgctatgagcgcggttacagtttgattttgtgtaataccgagggcgatattgatcgc
atgagccgcagtattgaaactttgatgcaaaaacgtgtcgatggtttgctactgatgtgc
accgaaagtcaccgcccgtcacaagatattctgcgttgttatccttccctgccaatcatt
atgatggactgggcccctttcgaaggggtaaatgacgtcattcaggataactctttatta
ggcggggaaatggcaacctcgtatttgattgccagaggatatgctcgcatcgcctgtatt
gctggcccacaagataaaacccccgctaaagaacgtttggaaggataccgccaagctatg
gaacgcgcgggtctgccggtgcttccaggttatgaagtggcgagtgattttgaatttggc
ggtggtttggtggccatgaaacagctacttgcattaccgcagccccctgaagccgttttt
accagtaatgatgctatggcggtgggggtttatcaggctttgcatcaagccggattatca
attccgcaagatatggcggtcattggttatgatgatattgaaatcgcacaatatatgacg
ccacctttgacgactattcatcagccgaaagattccctcggcgagctggccattgataca
cttatttatcgactgaataacccggaaacggaaccacaagttctgattctcactcccgag
ctgatagagcgcgggtcagttgtaacccactaa
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