Yersinia rochesterensis: CH54_2648
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Entry
CH54_2648 CDS
T03609
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ykr
Yersinia rochesterensis
Pathway
ykr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CH54_2648 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ykr03400
]
CH54_2648 (mutM)
Enzymes [BR:
ykr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CH54_2648 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CH54_2648 (mutM)
DNA repair and recombination proteins [BR:
ykr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CH54_2648 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
Zn_ribbon_RPB9
Gemin6_C
Motif
Other DBs
NCBI-ProteinID:
AJJ37372
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All DBs
Position
2864793..2865602
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AA seq
269 aa
AA seq
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MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILALSDQPVLSVQRRAKYLL
IELKTGWIIVHLGMSGSLRILSEETEAQKHDHVDLVISNGKILRYTDPRRFGAWLWAKDL
ATSSVLAHLGPEPLSDEFTAGYLFEKSRNKRTVVKQWLMDNKVVVGVGNIYASESLFTAG
ILPERAAGSLTEAEVTLLVATIKAVLLHSIEQGGTTLRDFLQSDGKPGYFAQELQVYGRA
GELCRRCGNVIEIAKHGQRSTFFCRHCQH
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaagttgaaaccagccgacgcgggatcgaaccttatcttgtcggc
caaacaattctttatgctgtggtcagaaatgcccgcttacgttggccagtatctgatgaa
atcttggcactcagtgaccaaccggtactcagtgtccaacgccgagctaaatatttactg
atagagctgaaaacaggctggattatcgtccatctagggatgtcaggtagcctgcgtatt
ttgtcggaagaaaccgaagcgcagaaacatgatcatgttgatttggttatcagcaatggc
aaaatcctgcgttataccgacccgcgccgctttggtgcctggctatgggcaaaagacctt
gcaaccagtagcgtactcgcacacttagggccagaacctctgagtgatgaatttaccgct
gggtatctgtttgaaaagtcacgtaacaaacgcactgtagttaagcagtggctaatggat
aataaagtggtggtcggggtgggcaacatctatgccagcgaatcactatttactgcgggt
attctgccggaacgcgccgctggttcattaaccgaagccgaggtcacactgttggtggca
acaattaaagccgtgttattgcactctattgagcagggtggcactacattgcgcgacttt
ttacagtcagatggcaaaccgggttattttgcacaagagttacaggtatatgggcgagcg
ggtgagttatgtcggcgctgtgggaatgtgattgaaattgcgaagcacgggcagcgtagc
acgtttttttgccgccactgccagcattaa
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