Yersinia rochesterensis: CH54_2688
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Entry
CH54_2688 CDS
T03609
Name
(GenBank) bacterial regulatory s, lacI family protein
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
ykr
Yersinia rochesterensis
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ykr03000
]
CH54_2688
Transcription factors [BR:
ykr03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CH54_2688
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_Crp_2
HTH_Tnp_ISL3
MarR_2
AIRS
HTH_24
TetR_N
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AJJ35641
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Position
complement(2905271..2906299)
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AA seq
342 aa
AA seq
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MEHKKEFTMATMKDVAEMAGVSTATVSRALMNPEKVSTITRQKVEQAVLAVGYSPHALSR
NIKRNESRTILVIVPDISDPFFADIIQGIEHAAAQQGYLILIGDCAQQPQQERSFVNLII
TKQIDGMLLLGSNLPFDASKEEQRNLPPMVMANEFAPELELPTVHIDNLTAAYEAVEYLI
RLGHKRIACVAGPENFPLCQYRLQGYIQALRRNGIEVDSNYIIRGDFSYEAGADTFIKLM
ELPEPPTAIFCHNDVMAIGAMWQAKKMGLRIPQDVSVVGFDDLKLSQYCDPPLTTVAQPR
YEIGRQAMLLLLEQLQGHPVQSGSRLLNTELIVRESTAAPKH
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
ttggaacataagaaagaattcacgatggccaccatgaaggatgtggccgaaatggccggt
gtttcgactgcgacggtatcgcgcgcattgatgaacccggaaaaagtttcaacaataact
cggcaaaaagtggaacaagctgttctggctgtcggttattctccccatgctttatctcgc
aatatcaaacgtaacgaatcgcgcactattctggttattgtgccggatatcagcgacccc
ttttttgctgacatcatccagggcattgaacatgccgccgcccaacaaggctatctgata
ttaattggtgattgcgcacaacaaccccagcaagagcgcagcttcgttaacctaatcatc
accaagcaaattgatggcatgttgctgttaggctccaatctacctttcgatgccagcaaa
gaagaacaacgtaatttaccgccgatggtaatggcaaacgagtttgccccggagctagag
ctacccaccgtccacattgataacctcaccgcagcctatgaagcggtagaatatctgatt
agattgggtcacaagcgcattgcctgtgttgccgggcctgaaaactttccgctgtgtcaa
tatcggctacagggctatatccaggcgctacgccgtaatggtatcgaggtcgacagcaac
tatattatacgcggcgattttagctatgaagcgggcgctgacacctttatcaagctgatg
gagctgccggaacccccgaccgcaatattctgtcacaatgatgtcatggcgatcggcgcg
atgtggcaggcgaagaaaatgggcctgcgtatcccacaggatgtctctgtcgtcggcttc
gacgacttgaaattgtcacagtattgcgatcctcccttgaccaccgtggcacaaccacgt
tatgaaattggtcggcaagccatgttactattactcgaacagttacaagggcatccagta
cagagtggctcccgcttgttaaataccgaattaattgtcagggaaagtactgctgcgcct
aaacactag
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