Yersinia rochesterensis: CH54_2708
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Entry
CH54_2708 CDS
T03609
Name
(GenBank) pyridine nucleotide-disulfide oxidoreductase family protein
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
ykr
Yersinia rochesterensis
Pathway
ykr00010
Glycolysis / Gluconeogenesis
ykr00020
Citrate cycle (TCA cycle)
ykr00260
Glycine, serine and threonine metabolism
ykr00280
Valine, leucine and isoleucine degradation
ykr00310
Lysine degradation
ykr00380
Tryptophan metabolism
ykr00620
Pyruvate metabolism
ykr00630
Glyoxylate and dicarboxylate metabolism
ykr00640
Propanoate metabolism
ykr00670
One carbon pool by folate
ykr00785
Lipoic acid metabolism
ykr01100
Metabolic pathways
ykr01110
Biosynthesis of secondary metabolites
ykr01120
Microbial metabolism in diverse environments
ykr01200
Carbon metabolism
ykr01210
2-Oxocarboxylic acid metabolism
ykr01240
Biosynthesis of cofactors
Module
ykr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ykr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ykr_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
ykr_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CH54_2708
00020 Citrate cycle (TCA cycle)
CH54_2708
00620 Pyruvate metabolism
CH54_2708
00630 Glyoxylate and dicarboxylate metabolism
CH54_2708
00640 Propanoate metabolism
CH54_2708
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CH54_2708
00280 Valine, leucine and isoleucine degradation
CH54_2708
00310 Lysine degradation
CH54_2708
00380 Tryptophan metabolism
CH54_2708
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CH54_2708
00670 One carbon pool by folate
CH54_2708
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ykr04147
]
CH54_2708
Enzymes [BR:
ykr01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
CH54_2708
Exosome [BR:
ykr04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
CH54_2708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox_3
GIDA
Pyr_redox
Lys_Orn_oxgnase
DAO
FAD_binding_2
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
AJJ34550
LinkDB
All DBs
Position
complement(2933896..2935359)
Genome browser
AA seq
487 aa
AA seq
DB search
MKTLNVDVAVIGGGTAGLGAYRAAKLSTPNVVMIEGGEYGTTCARVGCMPSKLLIAAAEA
VHQIEKAPGFGIHPQGNILINGRKVMDRVKRERDRFVGFVLEGVDNIPAEDKIQGYARFI
DDNTLQVDDHIGLSSQKIIAQRIVIATGSRPTWPAAWNELGDRLIVNDDVFNWDDLPESV
AVFGPGVIGLELGQALHRLGVQVKMFGVGGGVGPLTDSIVRNYAAKTLGEEFYLNPDVKV
EVMQREGDKVFIRYLDEAGSPQEIMVDYVLAATGRRPNVDKLGLENTSLELDERGVPSAD
RLTMQTSVPHIFIAGDASNQLPLLHEASDQARIAGVNAGGFPEVVPGLRRSVISVVFSDP
QIAMVGSTFRELSQKFSACGCFEIGEVSFENQGRSRVMLKNKGILRVYGEQGTGRFLGAE
MMGPSAEHIAHLLAWAHQQQMTINQMLDMPFYHPVIEEGLRTALRDLQSKLKLGTDEAER
CLRCPGE
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccttaaacgttgatgtcgccgttattggcggcggtactgccgggcttggcgct
tatcgcgctgccaaactgtcgaccccaaatgtggtgatgattgaaggtggcgaatacggc
accacctgtgcccgcgtcggttgcatgccatccaaactactgattgccgcggctgaagct
gtgcatcagattgaaaaagcgcccggttttggtatccatccgcaaggtaatatcttgatt
aatggccgcaaagtgatggatcgcgtgaagcgcgaacgcgaccgttttgttggttttgtg
ctggaaggtgtcgataatattccagcagaggataaaattcaggggtacgcccgttttatt
gatgacaatacactgcaagtagatgatcacattggcctttcttcacaaaaaatcattgcg
cagcgtatcgtgattgctaccggctctcgcccaacttggcctgccgcctggaatgagctg
ggtgaccggcttatcgtcaatgatgacgttttcaactgggatgacttacccgaatcagtc
gcagttttcggccctggggttatcgggctggagctgggtcaggcgctgcatcggcttggt
gttcaagttaaaatgttcggcgtgggtggtggtgtcggccccctgacagacagtattgtg
cgtaattacgcagcaaaaacgctgggtgaggaattctatctcaatccagatgtgaaagtt
gaagtgatgcagcgcgaaggggataaagtctttatccgctatttggatgaagccggttca
ccacaagaaattatggtggattatgttttagcggccactggtcgccgtccaaatgttgat
aaactggggctggaaaatacctcactggagcttgatgagcgcggtgtaccgtccgccgat
cggctgacaatgcagaccagcgtgccacatatctttatcgccggggatgccagtaaccaa
ttgccattgttgcatgaagccagtgatcaggcccgcattgccggggtgaatgctggcgga
ttccctgaagtagtgccgggtttacgccgcagcgtaatttcagtggtgttttctgatcca
caaatcgcaatggttggctctactttccgcgagctgtcgcaaaaattcagtgcatgcggt
tgttttgaaatcggcgaagtctcttttgagaaccaaggtcgctcgcgtgtcatgctgaaa
aacaaaggtattttgcgggtttatggcgaacagggaacaggtcgcttcctgggtgctgaa
atgatggggccgagcgccgagcatattgcacatctattagcgtgggcacatcaacagcaa
atgaccatcaatcaaatgctggatatgccgttctaccatcccgttattgaggaaggtttg
cgtacagcattacgtgatttgcagtccaagttaaaactgggcactgacgaggcggagcgt
tgtctgcgctgccctggtgaataa
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